Bacteroides fragilis NCTC 9343: BF9343_3779
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Entry
BF9343_3779 CDS
T00239
Symbol
ubb
Name
(GenBank) putative ubiquitin
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BF9343_3779 (ubb)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
BF9343_3779 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bfs03011
]
BF9343_3779 (ubb)
04121 Ubiquitin system [BR:
bfs04121
]
BF9343_3779 (ubb)
Ribosome [BR:
bfs03011
]
Ribosomal proteins
Eukaryotes
Large subunit
BF9343_3779 (ubb)
Archaea
BF9343_3779 (ubb)
Ubiquitin system [BR:
bfs04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
BF9343_3779 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_5
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
Plexin_RBD
OTU1_UBXL
UBL_UBAC1
Motif
Other DBs
NCBI-ProteinID:
CAH09560
UniProt:
Q5L8M7
Structure
PDB
PDBj
LinkDB
All DBs
Position
4570311..4570541
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AA seq
76 aa
AA seq
DB search
MQVFIKNRYGWTITLEVSPTDTVENVKQKIQDKEGFPPDKIRLIYGGKQMEDGRTLADYN
VQKDSTILICIRDVDC
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtttttataaaaaacagatatggctggaccataacattagaggtatcacctact
gatactgtagaaaacgtaaaacaaaaaattcaggataaagaaggttttccacctgataaa
ataaggcttatatatggaggaaaacaaatggaagatggacgaactttagcagattataat
gttcaaaaagactcaactatattaatttgcataagagatgtcgactgttaa
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