Bacteroides fragilis NCTC 9343: BF9343_4022
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Entry
BF9343_4022 CDS
T00239
Name
(GenBank) putative RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF9343_4022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfs03021
]
BF9343_4022
Transcription machinery [BR:
bfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF9343_4022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_24
HTH_10
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
CAH09803
UniProt:
Q5L7Z6
LinkDB
All DBs
Position
4859128..4859661
Genome browser
AA seq
177 aa
AA seq
DB search
MDLFSQFFQENQKKFLSFAYSYTRNKAAAEDILMEAMVSLWENREKWEKDSNLHALLLTI
IKNKSLNYLEHEQVRMKAEEAINTHKQRELDLRISTLEACEPATIFDTEIQRIVYKTLEQ
LPEQSRHIFILSRYHNTPNKKIAEQLGISIKSVEFHITKTLKLLRLELKDYLISLLF
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggacttattcagccagttctttcaagaaaaccagaagaagtttctgtcgtttgcttat
tcatacacccgaaataaagccgcagccgaagatattctgatggaagcaatggtcagcctg
tgggagaatcgcgaaaaatgggaaaaagattccaacctgcatgcattgctgcttactatc
atcaaaaacaaatcactcaattatcttgaacacgaacaagtgcgtatgaaagctgaagag
gcgatcaatacacataagcaacgtgaactcgatctccgtatctccaccttggaagcatgc
gaacctgcgactattttcgatactgagatacaacgcatcgtatataaaacacttgaacag
ctaccggaacaaagccgccacattttcatattaagccgttatcacaatactcccaataag
aagatagccgaacaactcggcatttctatcaaaagtgtagaatttcatatcaccaaaaca
ttgaaactgttgcgtctcgaactcaaagattatcttatatccctacttttttaa
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