Bacteroides fragilis NCTC 9343: BF9343_4112
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Entry
BF9343_4112 CDS
T00239
Symbol
hup3
Name
(GenBank) putative histone-like DNA-binding protein HU3
KO
K03530
DNA-binding protein HU-beta
Organism
bfs
Bacteroides fragilis NCTC 9343
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfs03032
]
BF9343_4112 (hup3)
03036 Chromosome and associated proteins [BR:
bfs03036
]
BF9343_4112 (hup3)
03400 DNA repair and recombination proteins [BR:
bfs03400
]
BF9343_4112 (hup3)
DNA replication proteins [BR:
bfs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BF9343_4112 (hup3)
Chromosome and associated proteins [BR:
bfs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BF9343_4112 (hup3)
DNA repair and recombination proteins [BR:
bfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BF9343_4112 (hup3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
VWA_3
Motif
Other DBs
NCBI-ProteinID:
CAH09893
UniProt:
Q5L7Q7
LinkDB
All DBs
Position
complement(4990635..4990907)
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AA seq
90 aa
AA seq
DB search
MNKAELINAMAAESGLSKVDSKKALEAFFSSVTKALSAGDKISLVGFGTFSVAERSARMG
INPSTKKAIEIPAKKVAKFKPGAELTDAIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggctgaacttattaatgcaatggcagcggaatccggcttgagtaaagtggat
tctaagaaagcgcttgaagctttcttttcttcggttacaaaagctttgtcggctggtgac
aaaatttccttggttggatttggtacattctctgtagctgaaagatcagcaagaatggga
atcaatccttctaccaagaaggcaattgagattcctgcaaagaaagttgctaaatttaaa
ccgggtgctgagctgacagatgctataaaataa
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