Buttiauxella ferragutiae: MNO13_02570
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Entry
MNO13_02570 CDS
T08104
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bft
Buttiauxella ferragutiae
Pathway
bft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNO13_02570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bft03019
]
MNO13_02570
03009 Ribosome biogenesis [BR:
bft03009
]
MNO13_02570
Enzymes [BR:
bft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MNO13_02570
Messenger RNA biogenesis [BR:
bft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MNO13_02570
Ribosome biogenesis [BR:
bft03009
]
Prokaryotic type
rRNA helicases
MNO13_02570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
AAA_22
DRTGG
Motif
Other DBs
NCBI-ProteinID:
UNK61860
LinkDB
All DBs
Position
543483..545474
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AA seq
663 aa
AA seq
DB search
MTDIIETTTIETTFSDLGLNDSILKALNDLGYEKPSPIQAECIPQLLAGRDVLGMAQTGS
GKTAAFSLPLLHNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQR
YDVQLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNLKGLVLDEADEMLRMGFIEDVETIM
AQIPEGHQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVHGMRKNE
ALVRFLESEDFDAAIIFVRTKNATLEVAEALEQSGYNSAALNGDMNQALREQTLERLKDG
RLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRER
RLLRNIERTMKLTIPEVELPNRELLSERRLAKFAAKVQQQLESSDLDLYRGLLAKIQPSA
ESEEALDMETLAAALLKMAQGERPLILPPDAPMRPRREFRERDERFERSDRAPRGDRGDR
APRGDRPERSDRPQRDGDAPRRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISS
RYIGNIKLFGTHSTIELPKGMPGEILQHFTRTRILNKPMNMQLMGDAQPRTDRGGERRGG
GAGAGAGRSFGGGGERREGGRGPRRDGPGAGAPRSFSGERREGGRGPRREDGAAPARRRT
TEA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcatcgagactactactatcgaaactactttttctgatctgggtcttaac
gactccatccttaaagccctgaacgatctgggttacgaaaaaccatctccaatccaggca
gagtgtattccacagctgctggctggccgcgatgtactgggtatggcccagacgggtagc
ggcaaaactgcagcgttctctttaccgctgctgcacaaccttgatccagagctgaaagca
ccacaaatcctggtgctggcaccgacccgcgaactggcggttcaggttgctgaagccatg
acggatttctctaaacatatgcacggcgtaaacgtggtagccctttacggtggccagcgt
tatgacgtgcagctgcgcgccctgcgtcagggaccacaaattgttgttggtaccccaggt
cgtctgcttgaccacttaaaacgcggtacgctgaatctgtccaacctgaaaggtctggta
ctggacgaagctgatgaaatgttgcgtatgggcttcatcgaagacgttgaaaccatcatg
gcgcagatcccagaaggtcatcagaccgctctgttctctgcaactatgccagaagcaatt
cgtcgtattactcgtcgcttcatgaaagatccgcaggaagttcgcattcaatctagcgta
acgactcgcccggacatcagccagagctactggactgtgcacggtatgcgtaaaaatgaa
gcgctggttcgcttcctggaatctgaagattttgatgcggcgatcattttcgtacgtacc
aaaaacgcgactctggaagtggctgaagcactggaacaaagcggctataacagcgcagca
ctgaacggtgacatgaaccaggcactgcgtgagcaaaccctggagcgtctgaaagacggt
cgtctggacatcctgattgcaaccgacgttgcggctcgtggcctggacgttgagcgtatc
agcctggttgttaactatgacatcccgatggactcagagtcttacgttcaccgtatcggc
cgtactggtcgtgcaggtcgtgctggccgtgcgctgctgttcgttgagaaccgcgagcgt
cgtctgctgcgcaacatcgaacgcaccatgaagctgactattcctgaagttgaactgcca
aaccgtgaactgctgagcgagcgtcgcctggctaagtttgccgctaaagttcagcagcaa
ctggaaagcagcgatctggatctgtaccgtggcctgctggcgaaaatccaaccttctgct
gaatcagaagaagcgctggatatggaaacactggcagcagcgttgctgaaaatggcacag
ggcgaacgtcctctgatcctgccaccagatgcaccaatgcgtccacgtcgtgaattccgt
gaacgtgatgagcgtttcgaacgttcagaccgtgctccacgtggtgaccgtggtgatcgt
gcaccacgcggtgaccgtccagagcgttcagatcgtccacagcgtgatggcgatgcacca
cgtcgtgaacgtcgtgacgttggcgatatggaactgtatcgcatcgaagttggccgtgat
gatggtgttgaagttcgtcatatcgttggcgctatcgctaacgaaggcgatatcagcagc
cgttacattggtaacatcaagctgttcggtacccactcaaccatcgagctgccaaaaggc
atgccaggtgagatcctgcagcactttacccgcactcgtattctgaacaaaccaatgaat
atgcagttgatgggtgatgcacagccacgtactgaccgtggcggtgaacgtcgtggcggc
ggtgctggtgcaggcgcaggccgtagcttcggtggtggtggtgagcgtcgtgaaggcggt
cgtggtccacgtcgtgacggtccaggtgctggcgcaccacgtagcttcagcggcgaacgt
cgcgaaggcggtcgtggcccacgtcgtgaagacggtgcagctcctgctcgtcgtcgtacc
acagaagcataa
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