Buttiauxella ferragutiae: MNO13_04360
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Entry
MNO13_04360 CDS
T08104
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bft
Buttiauxella ferragutiae
Pathway
bft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MNO13_04360 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bft03400
]
MNO13_04360 (recD)
Enzymes [BR:
bft01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MNO13_04360 (recD)
DNA repair and recombination proteins [BR:
bft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MNO13_04360 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Helicase_RecD
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
SH3_13
SLFN-g3_helicase
PhoH
AAA_16
nSTAND3
Herpes_Helicase
CbiA
MukB
AAA_28
TrwB_AAD_bind
T2SSE
SRP54
UvrD_C
AAA_33
AAA
DUF6225
ATPase
NTPase_1
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UNK62199
LinkDB
All DBs
Position
966715..968550
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AA seq
611 aa
AA seq
DB search
MKMSELLQQAVEQKLLRALDAQFAMIIAGDEQPAVMLAAALVSHDAGEGHVCIPLSRLTP
EFCFAGRQPDFAEQLFSLAALKSGWREALLASEAVSEHEGATPLKLIGERLYLNRMWQNE
LSVARFFGEENRAITLDGTQVIHVLNQLFEPMADIDWQKVAAAVALTRRISVISGGPGTG
KTTTVAKLLAALVQLSDDKPLRIQLAAPTGKAAARLTESLGSALRRLPLDDAQKAVLPND
ACTLHRLLGAQPNSQRLRYHAGNPLHLDVLVVDEASMVDLPMMAKLINAMPAHARVIFLG
DRDQLASVEAGAVLGDICHFVTHGYSPERATELSHLTGYSLPAGEGSQASVLRDGLCLLQ
KSYRFDSKSGIGQLAFAVNASDVKQAREVFSKGFGDISKQPLRETEDYARMIADTVEGYR
PYLELMRSHADPAVILDAFGRYQLLCALREGPFGVSGLNNRIELALIQKRLIERPNPTVS
RWYNGRPIMISRNDSSLGLFNGDIGIALDMGEGLRVWFPMPDGNIKSVQPSRLPGHETAF
AMTVHKSQGSEFEHAALVLPNQYTAVVTRELVYTAITRARNQLSLYADDRVLEKAIVTKT
ERRSGLMDSFS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtctgagctgttacagcaggctgtcgagcaaaagctgttgcgcgcactcgat
gcgcagtttgccatgataattgccggtgacgagcaacccgccgtgatgctggccgccgcg
ttagtcagccatgatgccggtgaaggtcatgtctgcattcctctttctcgtttaacgccc
gagttctgttttgccgggcgacaacccgattttgcagagcaactgttttccctggctgca
ctaaagtccggctggcgcgaggcgctgcttgcttctgaagcagtgagtgagcatgaaggt
gctacgccgctgaagctgattggtgagcggctgtacctcaatcggatgtggcaaaacgaa
ctgtcggtagcacgattttttggtgaggaaaatcgtgctattactctcgacggaacacag
gtcatccacgttctgaatcaactgtttgaaccgatggctgatatcgactggcaaaaggtg
gcggcagctgtcgccctgacgcggcgcatttctgtgatttctggtgggccgggaaccggc
aaaaccactacagttgccaaattgctcgccgccctggtgcagctttcggatgacaaacct
ttgcgtatccaacttgcggcacccaccgggaaagctgcggcgcggctgacggaatcgctg
ggttcggccttgcgccgcttgccactggatgacgcgcagaaagcggtattaccgaacgac
gcatgtacgttgcaccgcttactgggagcgcaacccaacagccaacgcttgcgttaccat
gccgggaatcctctgcatcttgatgtgctggtggttgatgaagcttcgatggtcgacttg
ccgatgatggcgaaattgatcaacgcaatgcctgcccatgcgcgcgtgattttcctcggc
gaccgtgaccaactggcttcagtagaagcgggtgcggtgcttggagatatatgccacttc
gtcacgcacggatattcaccggagagagccactgagttaagccacctgacgggctattca
ctgcctgcgggtgagggcagccaggcgagcgtattgcgtgatgggctttgtttgctgcaa
aaaagctaccgctttgatagcaagtccggcattgggcaactggcgtttgccgttaacgcc
agcgatgtgaagcaggccagagaggtcttctcaaaaggttttggtgatatttcgaaacag
ccgctccgtgagactgaagattatgcgcggatgattgccgacacggtggaaggttatcgg
ccctatcttgagttgatgcgtagccatgcagatcccgcggtgattcttgacgcctttggc
cgttatcagttgctgtgtgcgttgcgggaggggccgtttggcgttagtggcctgaataac
cgtatcgaactggcactgattcaaaaacgattgattgagcggccaaacccgacggtatcg
cgctggtataacggcaggccaattatgatttcccgtaacgacagttcgttggggttattc
aacggcgatattggtattgctctggacatgggggaggggctgcgcgtctggttcccgatg
ccggatggcaacatcaaatctgtgcagccgagccgtctgcctggccatgaaaccgcattc
gccatgacggtgcataaatctcaagggtcggaattcgagcacgccgcactggttttgcca
aatcaatacaccgcagtggtgacgcgtgagctggtctacaccgcaatcactcgtgctcgc
aatcaattgtctttgtacgccgatgatcgggtgttagaaaaagcgattgtaacgaagacg
gaacgtcgtagtggattgatggacagttttagctag
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