Botrytis cinerea (gray mold): BCIN_01g05560
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Entry
BCIN_01g05560 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03013
Nucleocytoplasmic transport
bfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
BCIN_01g05560
03015 mRNA surveillance pathway
BCIN_01g05560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_01g05560
03041 Spliceosome [BR:
bfu03041
]
BCIN_01g05560
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
BCIN_01g05560
Spliceosome [BR:
bfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
BCIN_01g05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
5442032
NCBI-ProteinID:
XP_024546327
UniProt:
A0A384J5N8
LinkDB
All DBs
Position
1:join(1946637..1946737,1946806..1946896,1946948..1947112,1947162..1948187,1948292..1948417)
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AA seq
502 aa
AA seq
DB search
MTSVDAKLLKSTKFPSEFNQKVDFQKVNLEVMKKWIAGKISDILGAEDDVVIELCFNLIE
GSRYPDIKKLQISLTGFLDKDTPGFCKELWKLCLSAQASPQGVPKELLEAKKLELIQEKI
QAEQAADDARRRREDGERRDREMHAIRDRERGDRGGRGRGGGDSWRGGRGDRDFDRSGGR
GFDRRGPRYSRSPRGARDNRVYVLPPRSDTYVPATRDRRDERRRPSLSRSRSPTRSKSPS
RSPSRRRSRSASESRSPSPRRRRSRSPERRNRGRGGRGRARSPERRPRRRSPSTSKSRSP
PRKRRRASTESLSRSPPPKSRRYRRRNTSSRSRSRSSSPSLSRSPTPRKRSASPSSPGRK
DRRGSRDVRRLSRSISRSASPPVRRRRDSSKDEVRNGRNDNGKRQRSLQRYEPTSRRRRN
SSSDVDDGRNKRADTEEKSDRGSPIRDVEANKTAGSAEPAQNLRKDPQKLSTELREKLLR
EKIKKMRTSSSTEHSITNANAH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgtcgatgcgaagctgctgaagtcgaccaagtttccatccgaattcaatcag
aaagtcgactttcagaaggttaatttggaggtaatgaaaaaatggatcgcaggaaagata
tcagatatattgggagctgaagacgatgttgtgattgaactatgttttaatctcattgag
ggctcacgatatccggatatcaaaaagttacaaatatcactcaccggttttctcgacaaa
gatacgccagggttttgcaaggagttatggaaactatgtctcagtgcgcaggccagtcct
caaggtgttcccaaagaacttcttgaggcgaaaaagttggaacttatacaggaaaagata
caagccgaacaggctgcagatgatgcacgtcggcgtcgcgaggacggtgaacggagagac
cgcgaaatgcacgcaataagagatcgcgaacgaggtgatcgcggcggacgtgggcgagga
ggaggagatagctggcgcggtggtcgcggagatcgggatttcgatcgaagtggtggcaga
gggttcgatcgaagaggtccaagatattcgaggtcgccacgcggagcgcgagacaacaga
gtctatgtcctaccacctcgaagtgatacctacgttcccgcaactcgtgatagacgagac
gaaaggcgaagaccatctttatcacgctctaggtcgcctacaagatcaaagtccccatcg
cgatctccatcaagacgacgcagtcggtcagcttcggaatctaggtcaccatcaccccgt
aggcgcaggtccagatcaccagagaggcgcaatcgcgggaggggtggtaggggacgcgcc
agaagcccagagagaaggccacgccgtagatccccttcgacttcaaaatcccgctctcca
cctcgaaagcgaagaagagcttcaacagaatctttgagtcgttctccacctccaaagtct
cgcagataccgtcgtcgtaacacgagttctagatctagatctcgctcttcatctccctca
ttaagtcgaagcccaaccccccggaagagaagtgcctcaccctcaagtcctggtagaaaa
gatagacgaggcagtcgcgatgtgaggcgactatcgcgaagcattagccggagcgcttct
cctcctgtcagacgtcgtagggattcttcaaaggatgaagtccgtaatggaaggaatgat
aatgggaagagacaacgttccctgcaaagatatgagcccacaagccgaagaagaaggaat
agttcttcagatgtagatgatggaagaaacaagagggctgatactgaagaaaaaagtgat
aggggatcaccaattcgagacgtcgaagccaacaaaacagctggatctgccgaacctgca
cagaatttgagaaaagatccgcagaagttatccaccgaattgcgagaaaaattgttaagg
gaaaagattaagaagatgagaacttcgagttccaccgaacattcaataactaatgctaac
gctcattga
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