Botrytis cinerea (gray mold): BCIN_01g08290
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Entry
BCIN_01g08290 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03013
Nucleocytoplasmic transport
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_01g08290
09122 Translation
03013 Nucleocytoplasmic transport
BCIN_01g08290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_01g08290
03041 Spliceosome [BR:
bfu03041
]
BCIN_01g08290
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
BCIN_01g08290
Spliceosome [BR:
bfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
BCIN_01g08290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
SPATA1_C
DUF5946
Motif
Other DBs
NCBI-GeneID:
5441689
NCBI-ProteinID:
XP_024546522
UniProt:
A0A384J716
LinkDB
All DBs
Position
1:join(2910260..2910609,2910674..2910917,2910982..2911023)
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AA seq
211 aa
AA seq
DB search
MAIDEIITDPSLKLALETSNQTREQAIALLDFVSASSTTSPPSNEVLLQISKQQKLLLTY
LAQLRGLHRDSHAGARETKALTAEARQEVDRLHLQLQNLYYEQRHLQGEIAACESYDHKY
QQLPLIPVDEFLVQHPEHADADENALMIARIDHEHQERLKLEEQRQGLLKKKQGLIADNK
KRKDDLANLDKDLEKFIDAAKPIQKTFERVV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgacgagataattacagacccctccctcaaacttgcgcttgagacttcgaat
cagacgcgagaacaagcaattgctctcctggacttcgtatcggcttcatctacaacatcc
cctccgtcaaacgaagtcctactccagatttctaaacaacaaaaattactccttacatat
cttgcacaattgagaggtctacatcgtgattctcatgccggtgcacgagaaacaaaggct
ttaaccgcggaagcgcgtcaagaagtagataggctgcatttacaacttcaaaatttatat
tacgaacaacggcatttacaaggggaaatcgctgcttgcgaatcatatgaccataaatat
cagcaacttcccctgataccagtcgacgaattcctagtgcaacatcctgagcacgctgac
gctgatgagaatgcgcttatgattgcaagaatagatcatgagcatcaggaaagattgaag
ttagaggaacagagacagggacttttgaagaagaaacaaggcttgattgccgataataag
aagaggaaggatgatctagccaatcttgacaaagatttggaaaagtttatcgatgctgcg
aaaccgatacagaaaactttcgagcgtgtggtatga
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