Botrytis cinerea (gray mold): BCIN_02g00200
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Entry
BCIN_02g00200 CDS
T01072
Symbol
Bcslx1
Name
(RefSeq) Bcslx1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
BCIN_02g00200 (Bcslx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfu03400
]
BCIN_02g00200 (Bcslx1)
DNA repair and recombination proteins [BR:
bfu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
BCIN_02g00200 (Bcslx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H_2
zf-HC5HC2H
FANCL_C
zf-RING_16
zf-RING_2
C1_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
5436429
NCBI-ProteinID:
XP_024546794
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All DBs
Position
2:join(180923..181037,181139..181271,181535..182561)
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AA seq
424 aa
AA seq
DB search
MLRQQMPIDRPIPSFYGCYLLRSTIRHSALYVGSTPNPVRRLRQHNGLVKGGAVRTSRGN
LRPWEMACIVTGFPTSIAALQFEWAWQNPHITLHIPPSSRISHATQKKRSGHPKRPRHTL
QSLLSNLHILLTVPSFSRWPLEIKFFAPDVHRAWLKWSKAATGSLRDTLPIITDFPPAES
QVNDEDGEITDRPYGIEALNVAYEDTKSHLEKGERIFHSEMKESCNICNQDLQHNSGLYT
ICPNINCHSITHMTCLSQHFLRAEKNEQSGEELIPVQGMCPGCRMDIRWNDVVKELSLRM
RGQKVVEKLLGAKRVKKGKGIATSQEVVESEGDEEEEEEEEKEQELVDYFDADEFHARNV
AQEENGFVDYLDDDDSDAVSNISMESSKSPKRKRTIGPFSKAKLIAVIEDSDVDEEIEGE
ELER
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtcaacaaatgcccatcgatcgcccaattccttcattttatggttgctacctt
ctgcgttcaaccattcgacatagtgctttatatgttggttccactcccaatccagtcaga
cgactccggcagcataatggattggtaaagggtggtgccgtgagaacaagtcgaggtaat
ttgagaccgtgggaaatggcgtgtatcgttaccgggtttcctacttccattgccgctcta
caatttgaatgggcctggcaaaatccacacataactcttcacatcccaccatcgtcacga
atttcacatgcaactcaaaagaaacgatcaggacatccaaaaagacctcgacataccctg
caatcactcttatcaaatctacatattttacttactgttccatcattttcacgatggcca
ttagaaataaaattctttgcaccagacgtccatagagcttggcttaaatggtcgaaagcc
gccaccggatctctgagggatactttgcctatcatcaccgattttcccccagcggaatca
caagtgaatgatgaggatggggagataacagaccgaccctatggaattgaagctttgaac
gtagcctatgaggacaccaaatcgcatttggagaagggggaacgaatatttcactcggag
atgaaagaatcttgcaacatttgcaaccaagaccttcaacacaactcgggtctctacacc
atttgtccgaatatcaattgtcattctatcactcacatgacatgcttgagtcaacatttt
cttcgggccgagaagaatgagcaatcgggtgaagaattgattcctgttcaagggatgtgt
cctggctgtcggatggacattcgatggaacgatgtggtgaaagaattatctcttcggatg
agaggtcaaaaggttgtggagaaattgttgggagcgaaaagagtaaagaagggaaagggc
attgcaacgtctcaggaagttgtggaatctgagggtgacgaggaggaagaagaggaggag
gagaaggaacaagaattggtggactactttgacgcagatgaattccatgcacgaaatgtc
gcccaagaggaaaatggtttcgtggattatctcgatgacgacgactccgatgctgtgtct
aatatcagtatggaaagcagcaaatcaccaaagcgaaagaggacaatcggcccttttagc
aaagcaaagcttattgctgttattgaggacagcgatgtggatgaagagattgaaggagaa
gaattggagcgatga
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