Botrytis cinerea (gray mold): BCIN_02g03880
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Entry
BCIN_02g03880 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03013
Nucleocytoplasmic transport
bfu03015
mRNA surveillance pathway
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_02g03880
09122 Translation
03013 Nucleocytoplasmic transport
BCIN_02g03880
03015 mRNA surveillance pathway
BCIN_02g03880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_02g03880
03041 Spliceosome [BR:
bfu03041
]
BCIN_02g03880
03009 Ribosome biogenesis [BR:
bfu03009
]
BCIN_02g03880
03012 Translation factors [BR:
bfu03012
]
BCIN_02g03880
Enzymes [BR:
bfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCIN_02g03880
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
BCIN_02g03880
mRNA cycle factors
Stress granule specific factors
BCIN_02g03880
Spliceosome [BR:
bfu03041
]
Complex C
Other components
EJC/TREX
BCIN_02g03880
Ribosome biogenesis [BR:
bfu03009
]
Eukaryotic type
90S particles
Helicases
BCIN_02g03880
Translation factors [BR:
bfu03012
]
Eukaryotic type
Initiation factors
eIF-4
BCIN_02g03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
COG4_N
AAA_22
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
5434313
NCBI-ProteinID:
XP_024547048
LinkDB
All DBs
Position
2:complement(join(1362392..1362450,1362506..1363546,1363596..1363695))
Genome browser
AA seq
399 aa
AA seq
DB search
MAEGIDRKMDDRMEFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQIC
KGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM
NVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELL
NRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQ
YFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQ
KERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPVNRENYIHRIGRSGRFGR
KGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLLT
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaggaattgatagaaagatggatgatcgcatggagtttacaacttctgcagat
gttaccgtcgcgccaactttccaagatatgcaccttaaggagaatttactccgtggtatc
tacgcatatggttacgaatccccttcagccgttcaatcccgtgcgattgttcaaatttgc
aaaggtcgcgacactattgcccaagcccaatctggtactggtaaaactgcaaccttctct
atcagtatgcttcaagtcatcgatacagctgtccgcgaaactcaagccttggttctgtca
cctactcgagaacttgcgactcaaattcaatccgtcgttatggctctgggagactacatg
aatgtacaatgccacgcttgtattggaggtaccaatgttggagaagatatccgcaagctg
gattatggacaacatattgtttctggaacaccaggtcgtgttgctgatatgattcgtcga
agaaatctccgcactcgtcatatcaagatgttggttcttgatgaagccgatgagttgttg
aaccgtggattcagggagcagatttacgatgtctaccgttatctcccacctgcgacacaa
gtcgttgtcgtttccgctaccctcccatacgacgttctcgacatgactacgaaatttatg
accgaccctgttcgcattcttgtcaagcgtgatgagttgactttggaagggttaaaacaa
tacttcattgccgtagagaaagaagattggaaattcgataccctttgtgatctatacgac
acactcactattactcaagccgttatcttttgcaacacgaggagaaaggttgattggttg
accgataagatgcgcgaggccaactttactgtatcctccatgcacggagagatgcctcag
aaggaaagagatagcattatgcaagatttccgccaaggaaactctagagtcttgatctct
acggatgtttgggctcgtggaattgacgttcaacaagtttcattggtgatcaattatgac
ttaccagttaaccgtgagaactatattcatcgcattggtcgaagtggtagatttggaaga
aagggtgttgcgatcaatttcgtgaccagtgaagacgttagaattttgagagatatcgag
ttgtactactctactcaaatcgacgagatgccaatgaatgttgcggatctccttacttaa
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