Botrytis cinerea (gray mold): BCIN_02g08150
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Entry
BCIN_02g08150 CDS
T01072
Symbol
Bcski3
Name
(RefSeq) Bcski3
KO
K12600
superkiller protein 3
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_02g08150 (Bcski3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_02g08150 (Bcski3)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
BCIN_02g08150 (Bcski3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_22
TPR_2
TPR_14
TPR_1
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_8
CFAP70_mid_TPR
TPR_11
CFAP70_TPR_C
TPR_9
ARM_TT21_N
ARM_TT21_C
TPR_Psidin_N
TPR_7
CABIN1_N
RMD1-3
ARM_TT21
TTC22_N
T7SS_EccA1_N
DUF3239
ANAPC3
E_motif
TPR_INTS8_3
Arm_PDR
Motif
Other DBs
NCBI-GeneID:
5426785
NCBI-ProteinID:
XP_001546309
UniProt:
A0A384JB51
LinkDB
All DBs
Position
2:complement(join(2921321..2925458,2925537..2925655))
Genome browser
AA seq
1418 aa
AA seq
DB search
MSGTKAALKAINAAVQSQKYDEAVEQAQKLLDSDPNSYQANIFLGFAYSKQVKYAEAEKA
YDAATKVKGGEPQAWQGLIQLYEKQGGPKVEQYQTAALQLAQIYQAHDDKYKCQDVIDKF
LAFAKNEGSRLQHRKSLEVILPDSPVYQYLEGRVHHPSHTYQIIAQITEFEEKERINKEI
GERRTRLGARIGQVTVEVKREVLKDSDLEEIYNKIIDWTTDDEIRRQYEEKLIQRCLDTL
VVLPPGDSKTEKRSKLFKLATDMVLIKHPYKLAWDIAIEWQDPEYVQGLDVNNLREYIDF
FPTSGLAQVLRGFMTSEISPFPPPPRTPAPTNNEKSDESSSDEDDGGGVTLDDFSMLAED
RLAMMIGGMTDSPTSVLAHRLMGEYYQFLDEHESVVELMRNANRLASEESNKIGKKFKNA
SQSFKALLGTALVFYQSPKNHPEAKALFDGLLKENPTSTPALIGIGLIYEEEDDFVAAID
FLERALQRDPTNIRVKTEAAWVKAINGDYIRGREELEECLPRIEAKDMKSRDLLAQTQYR
VGVCLWNIDTSKSARKDRKGAYSYFLASLKSNLNFAPAYTSLGIFYADYSNDKKRSRKCF
QKAFELSSSEVEAAERLARIFAGQGEWELVESVAQRVVNSGKVRPAPGSKKKGISWPFAA
LGTAELNKQDYSKSIVSFQSALRITPSDYHSWVGLGESYHNSGRYIAATKAFNHAEQFES
EIEQRQDGETWFAKHMLANVKRELGSFDDAIEGYKSVLQNRPAEFGVSIALIQTLVDSAW
DSIEKGLFGQAAQRATEAIEIASQVFESRADAFNLWRAVGDACAVYSWVWGRIDEFPDVN
IKKLLEEWKTTYDVFTDVDGVSVDVVLAKGLFSADEEDGVRRTRCLHAAILAHKRAIHAS
SHDTHAQAVAYYNLGWIEHRAHVCLAPSLKKKSTRYQKAAVRCFKRAIELEAGNSEFWNA
LGIVTSDLNPKVAQHSFVRSLYLNERSAQTWTNLGSLYLQQNDHQLANDAFTRAQATDPD
YSHAWIGQGLLALMLGDVKEANLLFTHAMEISGSSSLITHRQYSQSTFDQVLAAKNVTNV
ADLVQPLFVLNRVQSMAPDDLVSKHLSSLFSERARDISSAVTTLTTICGAAEADYEVTES
PESLSRFALAKADLARSQLANEQYEEAVESGDLALQLCDEDSGNELSAEDRQKCRLSAHL
TVGLAHYYLKNLDTALEYFEPALKESKGNPDAVCVLAQVLWAHGTESSRSKAQDILYECV
ESHPNHVQSVLLLGIIALFNSDTEGIEAVTAELQTLRTDKLITDAEQARVGEVLRSIAAF
SEEDSEIRVMSEVQKDVILHPGSTHGWSRLANITGDVKAAEMAVLTAKKSIFPRGVLGAE
ELSTAYAGTGKVGDAQRGIMVAPWKKDAWDAFSNGISA
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaccaaagccgcgctgaaagctataaatgctgcagttcaatctcaaaagtat
gatgaagctgtcgagcaagcccagaagcttcttgattcggatccaaacagctaccaggcg
aatatctttttaggatttgcctatagtaaacaagtgaaatacgcagaagcagaaaaggct
tacgatgctgcaactaaagtcaaggggggggagccacaggcatggcaaggtctcattcaa
ttgtacgagaagcagggcggtcccaaggttgagcaataccaaacagcagctttgcagtta
gctcaaatctatcaagctcacgacgataaatacaaatgtcaagatgtcattgacaaattt
ctcgcttttgccaaaaatgaaggatcccgcttgcaacacaggaagtctttggaagtcatt
ctacctgatagcccagtctatcaatatctggaaggtcgcgttcatcatccttcacatacc
tatcagatcatagctcagattaccgaattcgaagagaaagagcgtatcaacaaggaaata
ggagagcgacgaacaagattaggtgccagaattggtcaagtaacagtcgaagtaaaacga
gaagtcttgaaagatagtgatttggaagaaatttacaacaaaatcatagactggaccacc
gatgatgaaattcgccgtcaatacgaagagaaactcattcaaagatgtctagacactttg
gttgttctcccgcccggagactcaaagacagaaaaacgatcaaaactattcaagctggct
acagatatggttttgattaagcatccgtacaagctggcctgggatattgctattgagtgg
caagatcccgaatatgttcaaggcttggatgtcaacaatttgcgcgagtacatagatttc
tttcctacgagtggtcttgctcaggttcttcgaggattcatgaccagtgagatttcgcca
ttcccgccaccaccacgaactccagctcccacgaataacgagaaaagtgatgaaagtagt
tcagatgaagatgacggaggaggagtgacgttggatgacttttcgatgcttgcagaagat
cgcttggcaatgatgatagggggcatgacggactctcccacatcagttttggcacatcgt
ctcatgggagagtattatcaatttttagatgagcacgaaagcgtggtagaacttatgcgg
aacgcaaatcggcttgcatcggaagaatccaacaaaattggcaaaaagttcaaaaatgca
tcccaatctttcaaagccttgttgggtactgctctcgtattttatcaatcgccgaagaat
catccggaagcaaaagctctattcgatggtctgttgaaagaaaatccaacttcaactcct
gctctcataggaattggtttgatttatgaggaagaagacgactttgttgccgctattgac
ttccttgaacgtgctttacaacgagatcctacgaatatacgagttaagactgaggccgca
tgggtcaaggctattaatggcgattatattcgtggacgtgaggagttagaagagtgctta
cctcgaatcgaagccaaagatatgaagtctcgagacttactggcccagacgcaatatcgt
gtcggcgtttgcttatggaacatagatacttcgaaatctgcacgcaaggacagaaagggg
gcatactcatatttcctagcatcactgaaaagtaacctcaattttgctccggcatatacc
agcctgggtatattctacgcagactattcgaatgataaaaagagatctcgaaagtgtttt
cagaaagcctttgagctttcatcctcggaagtggaagctgctgagcgcttggctaggata
ttcgcaggccaaggcgagtgggagctggtcgaatcagttgctcaacgagttgtcaattca
ggaaaggtcagaccagcacctggctcgaagaaaaagggcatcagttggccatttgctgct
cttggcactgcggagttgaataaacaagactattccaagagtattgtttctttccaatcc
gcactgcgcattacgccttctgattatcattcgtgggttggcctaggcgaaagttatcac
aattctggacgttacattgctgcaacaaaagcttttaaccatgcagaacaattcgagagt
gagattgaacagagacaggatggtgagacttggtttgcaaagcatatgctcgccaatgta
aagcgtgagctcggaagcttcgatgatgctattgagggctataaatctgtacttcagaat
cgacctgcggaatttggcgtttcaattgctctgattcaaactttagtcgatagtgcctgg
gatagtattgagaagggactttttggacaagcagctcaacgtgcgaccgaggctattgaa
attgctagtcaagtttttgaaagcagagctgatgctttcaacctctggcgagctgttggc
gatgcttgtgctgtatactcctgggtttggggccgcattgacgagtttccagatgtaaat
atcaagaagttacttgaagaatggaaaactacttatgatgttttcacagacgtcgacgga
gtatctgttgatgtcgttttagcaaagggactattttctgccgacgaagaggatggagta
cgccgaactcgatgtcttcatgcagcaattttagctcacaagcgagctattcatgcctca
tctcacgatacacacgcccaagcagttgcttattacaaccttggttggattgaacatcgt
gctcatgtctgtttggcccctagtttgaagaagaaatctaccagatatcagaaagctgca
gtgcgatgtttcaagagagctatcgaattagaagcaggcaactcagagttctggaacgcg
ttgggtatagttaccagtgacttaaacccaaaggttgcacagcattcttttgttcgaagc
ctctacttgaatgagagaagtgctcagacatggactaatttgggatcattatatttacaa
cagaatgatcaccagcttgctaatgatgcctttacaagagctcaggctactgacccggat
tactcgcatgcttggattggacaggggcttcttgccctcatgttgggcgatgtgaaagaa
gctaatctcctttttactcatgctatggagatctctggatcgtcttctttaatcacgcat
cggcaatactcacagtcaacttttgatcaagttctagctgcgaagaatgtcaccaatgta
gcagacttggtgcaacctttgtttgtgctgaaccgagtgcaatcgatggctcccgatgat
cttgtctcaaagcatctctcatcactcttttctgagcgtgcacgtgatatttcttcagct
gtaacaaccttgaccacaatttgtggagcagctgaagccgattacgaggttacagaatca
ccagaatcattgtctcgatttgctttggccaaagcagatctcgctcgatctcaattggca
aatgaacagtatgaagaagctgtagaaagtggagacctcgctttacaactctgtgatgaa
gatagtggcaatgagctctctgcagaagaccgtcagaaatgtagactatcggcccatcta
actgttggtctagcccattactacctgaaaaatctcgatacagctcttgaatattttgag
cccgctctcaaagaatctaaaggaaatcctgatgcagtatgcgtccttgctcaggttttg
tgggctcatggtaccgaatcatcccgctccaaagcacaagatattctctatgaatgtgtg
gagtctcatcccaaccacgtacaatctgtgttactcctcgggattatagctctgttcaat
tcagataccgaaggtatcgaagcagtaaccgcggaattacaaactcttcgcactgataag
cttattacggatgcagaacaagcacgcgttggcgaagttcttcgttctattgctgcattt
tctgaagaggattccgagattagagtaatgagcgaggtccagaaagatgtgattctccat
ccaggctcaacgcatggttggtcaagactggcaaatataactggtgatgtaaaggcggct
gagatggcagtactgacggctaagaaatccatctttccacgtggagtcttaggtgctgag
gagttatcaactgcatatgccggtactgggaaggtcggcgatgctcaaaggggtattatg
gttgcaccgtggaagaaggatgcgtgggatgcttttagtaatggtatctctgcatag
DBGET
integrated database retrieval system
