Botrytis cinerea (gray mold): BCIN_02g09280
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Entry
BCIN_02g09280 CDS
T01072
Name
(RefSeq) Bcrna14
KO
K14408
cleavage stimulation factor subunit 3
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BCIN_02g09280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_02g09280
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
BCIN_02g09280
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
UTP6_C
TPR_19
TPR_16
HAT
TPR_9
DUF3246
Motif
Other DBs
NCBI-GeneID:
5434906
NCBI-ProteinID:
XP_024547410
UniProt:
A0A384JB57
LinkDB
All DBs
Position
2:complement(join(3289835..3289851,3290223..3291002,3291053..3292070,3292125..3292556,3292615..3293397))
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AA seq
1009 aa
AA seq
DB search
MAEEDADIALLHQFQAGQEATAWEDGDNEVAEGDLPSNTEDNNEHVKQDSVKDAQVSRAL
SPSGAAASAAGDDYDPSSVTSLPAVVTEQDSTRPSSQTSVRKPKTVGGFIADDSDEENDE
STPINTGHLQLPASDDPKRSPSPLQNSITQQEVPIKMENQVDSKPEALSSVPNSINPSNV
GTPIEQSSVQVPIPVGTSQSTSVPRARLPHDKIGMLEDRVKEDPRGDMEAWLSLIGEHRK
RNKLDDARAVYERFLKVFPHSAEIWVAYTEMELEYENFSAAEQIFGKSLLTVPNIQLWSV
YLNYIRRMNDLNVDPSGTARATVSQAYDFVLANIGIDRDSGKIWQDYIQFIRSAPGSIGG
NSWQDQQKMDQLRKAYQRAICVPMSNVNELWKQYDQFEMGLNKMTGRKFLQERSPNYMTA
RSANTALENIIRGLQRTTLPRLPPAFGFEGDQEYLHQLDLWKKWISWEQEDPLVLQSDEP
DAYKQRILYVYKQAVMALRFWPEIWVDAAEWCFNNNLDKEGDTFLADGIAANPESCLLAF
KKADRLESTLSTEEAGKTDVEKGTIVRAPYAKLLESLYELIAELKVRETKEKAKLEENSA
IDASISAIVRKAEDDDDDSDPDKDARESAKAAQLNAITQGYEMQRKLLQRTVSFSWIALM
RAMRRIQGNGAIDAKTGSRYVFAEARQRGMITSEVYVASALIEHMVYKDKSGTKIFERGA
KLFPTDEAYLLEYLKHLISISDITNARVAFETAVSRLAQKPETVYKTKPLYVYFHSYESK
FGTLDQIKKLEKRMAELFPDDPKLLRFSSRYSVDGFDPTAVRPIVSPASQMRPKLVMQSI
EQAPSVPDSPRPQYVQEQSPRPQQPPPFMHNQNTNSPKRPFPTEDFESELNPPRKLARGQ
SPLKGAAGRRLAQQKGIQQTQGTPAWQSNAAPYVIPRDITFLLSIIPRSDIYLRDPQLKG
VKFIPNDLVQLLARTEVPDFMQWKSAREQPQKSQQPQQSQQRYDGYSYR
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagatgcagatatagctcttttacatcagtttcaggcaggtcaagaagct
acggcttgggaagatggagataatgaagtcgcagagggtgatctaccttccaatacagaa
gataacaacgaacatgtcaagcaagattccgttaaagatgcccaagtttctcgtgctttg
tctccttcaggcgcagccgcttcggccgctggcgacgattatgacccttcctctgttaca
tcccttccagctgtggtaactgaacaagattctacaagacccagctctcaaacttctgtg
cgcaaaccaaaaactgtcggaggatttattgcagatgattctgatgaggagaatgacgaa
tctacaccaattaatactggacatttgcaacttccagcctctgatgaccccaaacgatct
ccttctccattgcaaaattctattactcaacaggaagtacccatcaaaatggagaatcaa
gttgattccaagcccgaggcactttcctctgttcccaattccattaacccgagtaacgtt
ggaacacctatagaacaatcttcggtgcaagtgcccattcctgttggtacatcacaaagt
acatctgttcctagagctcgcctaccccatgataagatcggtatgcttgaagatcgggtc
aaggaggatcctcgaggtgacatggaagcatggctttctttgattggtgagcatcgcaag
cgtaacaagttggatgatgccagagcagtctatgaaagatttttaaaggtctttccacat
tctgcggagatttgggttgcttatactgaaatggaactcgaatacgaaaactttagtgca
gcagaacaaatctttggcaaatcattgttgacggtcccgaacattcaattatggtcggtt
tatttgaactacatacgtcgcatgaatgaccttaatgtcgatcccagtggtacagctcgt
gcaaccgtgtctcaagcatacgattttgtgttggcaaacattgggattgatagggattct
ggtaaaatttggcaggattatattcaattcattcgtagtgcacctggttcaattggtggc
aatagttggcaagatcaacaaaagatggatcaattgcgaaaagcctatcaacgtgccatc
tgtgttcccatgtcaaacgtgaatgaattatggaaacaatatgatcagtttgagatgggc
ttgaacaagatgacgggtcgcaaatttcttcaagagagatctccaaattacatgactgca
agaagtgcgaatactgcgcttgaaaatatcattcgcggacttcagcgcacaactttacct
cgacttccaccggcttttggatttgagggtgatcaagaatatttacatcaactcgatcta
tggaagaagtggatatcttgggaacaggaagatcctttggttttgcagtcggatgagccg
gatgcttacaaacagcgcatcttgtatgtctacaagcaagctgtcatggcattacgcttt
tggcctgagatctgggtagatgctgctgagtggtgcttcaacaacaacttagacaaggaa
ggcgacacttttctcgccgatggaattgccgcaaaccctgaaagttgtctattagctttc
aaaaaagccgatcgacttgaatctacgctctctactgaggaagctgggaagactgatgtt
gagaaaggaacaattgtccgggcaccttacgccaaacttctggaatctctttatgaactg
atcgcggagttgaaagtcagagagacaaaagaaaaagccaaacttgaggaaaactcagct
atcgacgcttctatcagtgcaattgtgagaaaggcagaggatgatgatgatgatagtgat
cctgataaagatgctcgagaaagtgctaaagctgctcaactgaatgccatcacacagggc
tatgaaatgcagagaaaacttttgcagagaaccgtatctttctcctggattgcactaatg
agggctatgcgacgcattcaaggaaatggtgcaatcgacgccaaaactggatccagatac
gtctttgctgaggcccgtcaacgtggcatgatcacaagtgaagtttacgttgccagcgcg
ttgattgaacatatggtatacaaggacaaatctggtactaagatctttgaaaggggtgct
aaacttttcccaaccgatgaagcctaccttctagagtatctaaagcacttgatttccatt
tctgacatcaccaatgctagggtagctttcgaaactgcagttagtcgtctagcacagaaa
cctgaaactgtttacaaaacaaagccactatatgtttacttccatagctacgagtctaaa
tttggaacactagatcaaatcaagaagctagaaaagcgcatggcagaactctttccggat
gatccaaagcttctcagattttcttcgcgctatagtgtggatggattcgaccctactgcc
gtacgaccaattgtttcgcctgcttcacaaatgagacccaaattggtcatgcaatcaatt
gagcaagccccatccgttccagatagtccacgtcctcagtacgtacaagagcaaagccct
cgcccacagcaaccgccaccgtttatgcataatcaaaacacaaactcaccaaagcggcca
ttcccaaccgaagattttgaaagcgagctcaaccctccacgaaaactcgctcggggtcag
tctcctttgaagggagccgcaggacgcagattggcgcaacaaaagggaatacaacaaacc
caaggcacacctgcatggcaatcaaacgccgcaccatatgtaattccaagagatatcaca
ttcctccttagcatcattcctcggtctgatatctatcttcgcgacccacaattgaagggc
gtcaaattcattccaaatgacttggtgcagctccttgcccgtacggaggtaccggacttc
atgcaatggaaaagtgcgcgagaacaacctcaaaaatctcaacaaccacaacaatcacaa
caacgctatgacggatattcttatcgataa
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