Botrytis cinerea (gray mold): BCIN_03g07080
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Entry
BCIN_03g07080 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_03g07080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfu03041
]
BCIN_03g07080
03009 Ribosome biogenesis [BR:
bfu03009
]
BCIN_03g07080
Enzymes [BR:
bfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCIN_03g07080
Spliceosome [BR:
bfu03041
]
Complex A
U1 snRNP components
U1 related factors
BCIN_03g07080
Complex B
BCIN_03g07080
Ribosome biogenesis [BR:
bfu03009
]
Eukaryotic type
Pre-60S particles
Helicases
BCIN_03g07080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
5430391
NCBI-ProteinID:
XP_024547900
LinkDB
All DBs
Position
3:join(2405734..2405846,2406052..2406104,2406158..2406301,2406363..2407331,2407380..2407487,2407927..2408055,2408107..2408262,2408341..2408393)
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AA seq
574 aa
AA seq
DB search
MSYGGGYGGGGRGGGNGYGNGDSSYGRGNSYSNGYSNGGSNGYSGGGGGGYGGGRGGGGG
GGNVNGYSGGGGGGYGGGGGYGGGGAGGDRMNNLGANLQKQNWDLSTMPKFEKSFYKEDP
VVAARSEEDVAKFRAQHNIAVQGPNIPKPVETFDEAGFPAYVMTEVKAQGFPAPTPIQSQ
GWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQI
QQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVT
YLVLDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRALASDYLNEFIQVNIG
SLELSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQ
DGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSE
DYIHRIGRTGRAGQKGTAITLFTTDNQKQARDLVNVLTEAKQVIDPRLAEMTRYGGGGGG
RGYGGRGYGGGRGRGGGGNFSSSNAAPLGGGRRW
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatggaggaggatatggtggcggcggccgtggtggcggtaacgggtacggaaat
ggagattcctcatatggcagaggcaactcttactccaatggatattcaaatggtggatct
aatggatactctggaggcggtggaggtggttacggaggtggcagaggcggcggaggtggt
ggcggaaatgtcaacggctactctggaggaggcggtggcggttacggaggaggtggtgga
tatggcggtggtggtgctggtggagaccgcatgaacaaccttggtgctaacctccaaaag
caaaactgggatctcagcaccatgccaaagttcgagaagtctttctacaaggaggaccca
gtcgttgctgctcgttcagaagaagatgttgccaaattcagagctcagcacaacattgcc
gttcaaggcccaaacattccaaaacctgtcgagaccttcgatgaggctggattccctgca
tacgtcatgaccgaagtcaaggcccaaggtttcccagcgcctactcctattcaatctcaa
ggttggcctatggctctctccggacgtgatgtcgttggtattgccgagaccggttccgga
aagaccctcacctactgtcttccagccatcgtacacatcaacgcacaaccacttctcgct
cctggtgacggcccaattgtcttggtccttgcacctacccgtgagttggctgttcaaatt
caacaagaaatcaccaagttcggaaagtcctcccgtatccgcaacacttgtgtttacgga
ggtgttcctaagggtggtcaaatccgtgacctcgccaagggtgttgaggtctgtattgcc
actccgggtcgtctcattgatatgatcgagtctggcaagaccaacctccgtcgtgttaca
taccttgttctcgacgaggctgatcgtatgttggacatgggtttcgagccacaaatccgt
aagattcttggacagatcagaccagatagacaaacttgcatgtggtctgctacttggcca
aaggaagttagagcccttgcctctgattacttgaatgaattcatccaagtcaacattggt
tccttggagctctctgctaaccacagaattactcaaattgtcgaagttgtttctgagttc
gagaagcgcgataagatgaccaagcatttggaaaagattatggaagacaaggataacaag
attttgatcttcacaggaaccaagcgtgttgctgacgatatcacacgtttccttagacaa
gatggatggcctgcgctctctattcacggtgacaagcaacaaaacgagcgtgattgggtg
ttgaatgagtttaagactggcaagagtccgatcatggttgctactgatgtagcttcgcgt
ggtattgatgtccgaaacattacccatgtgttcaactatgactaccctaacaattcggag
gattatatccatcgtattggtcgtacaggtcgtgctggacagaagggaaccgcaatcact
ctcttcaccactgacaatcaaaagcaggctcgtgatctcgtgaacgttctcactgaagct
aagcaggtcattgatcctcgtcttgctgagatgaccagatatggaggtggtggcggaggt
agaggttatggtggacgtggctacggcggtggccgtggacgtggtggcggtggcaatttt
tcatcttctaacgctgctcctttaggtggaggcagacgttggtaa
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