Botrytis cinerea (gray mold): BCIN_04g00240
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Entry
BCIN_04g00240 CDS
T01072
Symbol
Bcrfa1
Name
(RefSeq) Bcrfa1
KO
K07466
replication factor A1
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03030
DNA replication
bfu03420
Nucleotide excision repair
bfu03430
Mismatch repair
bfu03440
Homologous recombination
bfu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCIN_04g00240 (Bcrfa1)
03420 Nucleotide excision repair
BCIN_04g00240 (Bcrfa1)
03430 Mismatch repair
BCIN_04g00240 (Bcrfa1)
03440 Homologous recombination
BCIN_04g00240 (Bcrfa1)
03460 Fanconi anemia pathway
BCIN_04g00240 (Bcrfa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfu03000
]
BCIN_04g00240 (Bcrfa1)
03032 DNA replication proteins [BR:
bfu03032
]
BCIN_04g00240 (Bcrfa1)
03400 DNA repair and recombination proteins [BR:
bfu03400
]
BCIN_04g00240 (Bcrfa1)
Transcription factors [BR:
bfu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
BCIN_04g00240 (Bcrfa1)
DNA replication proteins [BR:
bfu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
BCIN_04g00240 (Bcrfa1)
DNA repair and recombination proteins [BR:
bfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
BCIN_04g00240 (Bcrfa1)
MMR (mismatch excision repair)
BCIN_04g00240 (Bcrfa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
BCIN_04g00240 (Bcrfa1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
zf-like
DUF936
Motif
Other DBs
NCBI-GeneID:
5428612
NCBI-ProteinID:
XP_024548073
UniProt:
A0A384JDY8
LinkDB
All DBs
Position
4:join(88124..88164,88212..88375,88440..88530,88584..90023,90084..90177)
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AA seq
609 aa
AA seq
DB search
MEVAKAQITQGALNAIFNDTDRVIKDFPVPVCQVVQVKPMGAGVDGQAERFRLVVSDIQN
FVQCMLATQANHVIHDGKLTKGCFIRLKNYQANEVKGKRILIILDIDVIESLGTMEKIGE
PTAVKVEEDVKPTNTSIAGSGFYGNKPQPQQPAAQDRALPSRNGPSSSSSHATIYPIESL
SPYAHKWTIKARVTSKSDIRTWSKPNSEGKLFSVNLLDESGEIKATGFNEQCDALYETFQ
EGSVYYITSPCRVQIAKKQFSNINNDYELMFERDTLVEKAEDQDNVPQVRYNFSNIGDLQ
SIEKDSTVDLIAVLKEVGEISEITSKTTSKPYSKRELTLVDETGYSVRLTIWGKTATSFD
ASPESVVAFKGVKVSDFGGRSLSLLSSGSMSFDPDIQEAHKLKGWYDSQGRTSNFASHSN
LASAGAAGGRQDPIKTIAQVKDEGLGMSEENTDYFSSRATIVYIKQDNFCYPACLNENCN
KKVVDQNDGTWRCEKCNQSHPKPEYRYILALNVNDHTGQMWLTAFDEVGRLIMGKSADEL
MELKENDPPAMERVFEDANCKMMTFKVRCKTDTYQDQARVRYSVMSALAVNYAADALKLA
ELIKAYNID
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgcaaaagctcaaattactcaaggtgcattgaatgctatcttcaatgatact
gatcgagtaataaaagatttcccggtaccagtatgccaggtagtacaagtcaaacctatg
ggtgcgggtgtagatggacaagccgaaagattcagactcgtcgtgagcgacattcaaaac
tttgtacagtgcatgcttgccactcaggcaaaccatgtaatccacgacggaaagttgaca
aaaggctgcttcatccgtctgaagaactaccaggcgaatgaagtcaagggaaaaagaatt
ctgattattctcgatatcgatgttatcgaaagcttgggcactatggagaagattggagaa
ccaaccgcggtcaaagtcgaggaggatgtgaagccaacaaataccagcatcgccggaagt
ggcttctacggaaacaaacctcaaccccaacaacctgcagcccaagatcgtgcactccca
tcccgcaacggaccctctagctcctcatcacacgccactatatatcccattgagtcttta
tcgccatatgcccataaatggacaatcaaagcaagagttacaagcaagtcagatatcaga
acatggtccaagccgaatagtgaaggaaagctcttcagcgtcaatcttctcgatgagagt
ggcgagattaaggctacgggtttcaacgaacagtgcgatgctttatatgagacttttcaa
gaaggtagcgtctattacattacaagtccatgtcgtgttcaaatcgccaagaagcaattc
tccaacataaataatgactatgagcttatgttcgaacgagataccctggtagagaaagct
gaagaccaagataacgtccctcaagtacgatataacttttcgaacattggagatttacag
tctattgaaaaagacagcacagttgatctcattgctgtgctcaaggaagttggagagatt
tcagaaattacgtcgaagacgacgagcaaaccctacagcaaaagagagttaaccttggtt
gatgagaccggatattccgtacgattgactatatggggcaagacagcaacctcttttgat
gccagtccagagtctgtcgtggctttcaagggtgtcaaagtttccgatttcggtggtaga
agtctgagcttgttatcttctggctctatgtcttttgacccagatattcaagaagcacac
aaactcaaggggtggtatgactcccaaggtcgtacttctaactttgcctctcatagcaat
ttggccagtgctggagcagcaggaggccgccaagatcccatcaagaccatcgctcaagtc
aaggacgaaggtcttggaatgtctgaggagaacacagactacttctcttctagagccacc
atcgtctacattaaacaagataacttttgctacccagcttgcctcaacgagaactgcaac
aagaaagtcgttgaccaaaatgatggtacctggcgctgcgagaaatgtaaccaaagtcac
cccaaacccgaatatcgctatattcttgccttgaatgtcaacgatcatacgggccaaatg
tggttaacggcatttgatgaagtgggaagactgatcatgggaaagagtgcagatgagcta
atggagctgaaggagaatgacccaccagctatggagagagtgtttgaggatgcaaactgc
aagatgatgacattcaaggttcgatgcaaaactgacacatatcaagatcaagcaagggtt
cgatattcagtcatgtcagccttggctgtaaattacgctgctgatgctctgaagttggcg
gagttgatcaaggcgtacaacattgattag
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