Botrytis cinerea (gray mold): BCIN_04g05620
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Entry
BCIN_04g05620 CDS
T01072
Symbol
Bcspt6
Name
(RefSeq) Bcspt6
KO
K11292
transcription elongation factor SPT6
Organism
bfu
Botrytis cinerea (gray mold)
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfu03021
]
BCIN_04g05620 (Bcspt6)
03036 Chromosome and associated proteins [BR:
bfu03036
]
BCIN_04g05620 (Bcspt6)
Transcription machinery [BR:
bfu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
BCIN_04g05620 (Bcspt6)
Chromosome and associated proteins [BR:
bfu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
BCIN_04g05620 (Bcspt6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_9
S1
HHH_3
Motif
Other DBs
NCBI-GeneID:
5438334
NCBI-ProteinID:
XP_001557711
UniProt:
A0A384JFM3
LinkDB
All DBs
Position
4:complement(join(1961346..1961590,1961646..1965267,1965316..1965495,1965552..1965728))
Genome browser
AA seq
1407 aa
AA seq
DB search
MSMRDLIDGDVEVDEEENDEEFDEETGEARSAEPRRRNGGLEDDSSEEEDDDDEEAARAI
REGFIVDEDEEDDDDARSRRRRREKKRRREQREEEGLDDEDLDLIGEANPEWERKTTQQP
KFKRLKRGHREDNDQDRERGLDQIFSDDEEQDAPHDYERSFARPDHRIDEFADFIEEDEL
EDDERDRLAEEREVARPREKGYVGGAEASGLDKDALDDMEAIFGNGEDYDWALALEDEAE
AAEAGDQNLELKDVFEPSQLAEKLLTDEDNYIRYSDEPERFQLDRKPYKHLQITDEQFKE
EARWITSLIWPKKNFNGDMQAPFTKAISKVLEFFVVDEVEVPYVFQHRKDYLIHARKNKT
RSDNPDAPEYEVSADKLLNQDDLWRILELDLKFRALIEKRNVLDKTYENLKLAVGISDAT
FEQMLPDAQTMEELQDIQDYLYFQYSSEIKSLQDSNGEVKEKRAGNKASRFDRVRKSRAY
ELVRAYGITADEVAGNVLMEGRKKYTEDPPLSPIDLADTLASPEDFPTGDGVLVAARSLF
AEELFMSPKMRQHFRKHHYMQGLVSCARTDKGLKKIDEQHPYYELKYLRNQTFMDIASKP
EMFLKMLKAEEEGLLEVRVSLQNERDFRRQLFGEFRSDNYSEVADAWNDERQKVLDIAFS
KLERTITKGVKESMRTECQDSILKICREEYSRKLDQAPYKPRGMVLGTIPRVLALSNGNG
DPNRDAVCWAYVEEDGRVLDHGKFDNLSRDQRAREAFVDLVRRKKPDVLGVSGFSVETHK
LVSSLKELVQEHSLRGNEFDNEDGDGERSEPLDIIVVNDEVARLYKDSPRAAVDHPAFAP
LARYCVGLAKYLQNPMKEYAALGKDIISLSFHPSQQLLPEDKLRRQLETAMVDMVNLCGV
NINEAVNDAYTANLLPFICGLGPRKATAVLKSINANGGVVNTREELVGDPDNNKLPVVGP
RVWNNCASFLYMEYESANPASDYLDNTRVHPEDYELGRKMAADALELDEEDVKAEVDEGG
PGAIVRKLIKDDEQEKVNDLILEEYADQLEKNYNQRKRATLETIRAELLAPYEELRRNFG
MLSDDEIFTMLTGETHESLCEGMIVSVNIRVAKDDFIIAKLDSGIEGRVEKDDGSDNPNA
SLNRLFSVGQTAQAKLLDVDRRNFAARLSLRESQMRPYRRRIDRDISTWDIHQEQKDREE
LREKDKATGRVQRVVKHPLFRPFNATQAEEYLGSQAPGDAVIRPSSKGNDHLAVTWKVAD
GVYQHLDVLELQKENEFSLGRQLRINNKYNYSDLDELIVDHVKAMSRKVEEMMLHEKFQK
GSRTDTERWLTTYTEANPKRSVYAFCLDTRHPGYFHLCFKAGQQARVNSWAVRIVPNAFE
LLKSQYPDMKALCNGFKLRHTAEMNRR
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcgcgatctgattgacggtgacgttgaggttgatgaagaggagaatgatgag
gaattcgacgaggaaactggtgaagctcgatccgcggaacctcgaagacgaaacggaggc
ttggaagatgattcaagtgaagaagaagatgatgacgatgaggaggcagctcgtgcaatt
cgagaaggcttcatcgtagatgaagatgaagaggacgatgatgatgcgagaagtagacgt
cgccgcagagaaaagaagcgtcgcagagagcagcgtgaagaagagggtttagatgatgaa
gatttggatctcatcggagaagcaaatccagaatgggagagaaagacaacacaacagcca
aagtttaagcgtcttaagcgtggccaccgagaagacaacgaccaggaccgagagcgaggc
ctagaccaaatcttctctgatgatgaagaacaagatgcgccacacgattatgagcgatcc
tttgcacgcccagatcatcgcattgatgaattcgcagatttcatcgaagaagacgagctt
gaggacgatgaaagagacagacttgccgaggaaagagaggtagcccgccctagagaaaag
ggttacgttggtggtgcggaagcatcaggtctcgacaaggatgctttggatgatatggaa
gctatctttgggaatggcgaggactacgattgggctctcgctttggaggacgaggctgag
gcagcggaagctggagaccagaaccttgaacttaaagatgtcttcgaaccttcgcagctc
gccgagaagttacttacagatgaggataactatattcggtactccgatgaaccggaacga
ttccagctcgatcgaaaaccttataaacatttacaaatcaccgacgaacaattcaaagag
gaagctcgatggatcacaagtctcatctggccaaaaaagaacttcaacggagatatgcaa
gctccattcaccaaagctattagcaaagtcttggagttctttgttgtggatgaagtcgaa
gttccttacgtatttcaacatcgaaaggattatctcatccatgccagaaaaaacaaaaca
cgatcggataacccagatgcgcctgaatacgaagtaagcgcagacaaactcctgaaccaa
gacgacctctggcgcattttggaactcgacttgaaatttagggcactgatcgagaagcgt
aacgttctagacaagacctatgagaacctaaagttggccgttggtattagtgatgcaacc
ttcgagcaaatgttaccggatgcccaaactatggaagagcttcaagatatccaggattac
ctgtattttcaatattcctcggaaatcaagtctctgcaagattccaacggtgaagtcaaa
gaaaagcgagctggcaacaaagcatcaagattcgaccgtgttcgcaaaagcagggcttat
gaactcgtgcgagcttatggaatcacggccgacgaggttgctggaaacgttttgatggaa
ggccgcaaaaaatacacagaagatcctcctttgagcccaatcgatctcgccgatactctg
gctagcccagaagatttccccacaggcgatggagttttggtagcagcacgaagcttattc
gccgaggaacttttcatgagcccgaagatgcgccaacatttcagaaaacatcattatatg
caaggactcgtcagctgtgctagaaccgacaaaggtctcaagaagattgatgaacagcac
ccttactacgaattaaaatatctcaggaaccagactttcatggacattgcaagcaagcct
gagatgtttttgaagatgttgaaagccgaggaagaaggattactagaggttcgagtatct
ctccaaaacgaacgcgatttcagaagacaactctttggagagttcaggtcagacaactac
agtgaggtagctgatgcgtggaatgatgaaagacagaaagttctcgacatagcattttca
aagcttgaaaggactatcaccaaaggagtcaaagaaagcatgcgtacagagtgtcaagat
tctatcctcaaaatctgtcgagaagaatactcgagaaagcttgaccaggcgccatacaag
ccgagaggcatggttctgggtactattcctcgagtgcttgctctatctaatggtaatggt
gaccccaatcgcgatgccgtatgctgggcctacgtcgaagaggacggtcgggttctggat
catggaaagtttgataatctttccagagaccagagagctagagaggcatttgtcgatttg
gtgcgtaggaagaaacccgacgttcttggagtcagtggtttctctgtcgagactcacaag
cttgtgtcaagcctgaaagaattggtgcaggaacactctctgcgaggaaatgagtttgat
aatgaagatggcgacggtgagcgaagtgagcctctagacattatcgtcgtgaatgacgaa
gttgctcgactttacaaagacagcccaagagccgctgtcgatcaccctgcatttgctcca
ctcgctagatattgtgttggcttggccaaatatctccagaacccaatgaaggaatacgca
gcccttggaaaggatattatctcattatccttccacccatctcaacagttgttgccagag
gataagcttcgaagacaattggagactgcaatggtggatatggtcaatctctgtggtgtc
aatatcaacgaagcagttaatgacgcttatactgcaaaccttttaccttttatctgtggt
cttggccctcgaaaggctaccgctgtcctaaaatctattaatgccaatggtggagtggtg
aatactcgtgaagaacttgtcggtgatccagacaacaacaaattgccagttgtaggtcca
agagtttggaacaactgtgccagtttcctatacatggagtatgaaagcgcaaatccagct
tctgactatcttgacaatacccgtgtgcatccagaggactacgaactcggtaggaagatg
gcggccgatgcactcgagcttgatgaagaagatgtcaaggcagaagtagacgagggagga
ccaggagccattgtccggaagctcatcaaggatgatgagcaggagaaggtgaacgacctg
attcttgaagagtatgccgatcaattggagaaaaattacaaccaacgcaaacgtgcaacg
ctcgagactattcgcgccgagttgttggcgccatacgaagaattgcgccgcaactttggc
atgctgtctgatgacgaaattttcaccatgttgactggagaaactcatgagtcgctatgc
gaaggcatgatcgtatctgtcaacattagagtagcaaaagatgatttcatcatcgctaag
ctggattctggaattgaaggccgtgtcgagaaagatgatggctcagataaccccaacgcc
tctttgaatcgtctattttctgtgggccaaactgctcaagccaagttgcttgacgttgat
cgacgaaattttgctgccagattatcgctacgcgagtcacaaatgcgaccatacaggaga
cgcattgaccgcgatataagtacctgggatatacatcaagagcaaaaggatagagaggag
ctccgtgaaaaggacaaggccacaggccgcgtccaaagagttgtcaagcaccctctcttc
agaccattcaatgccacccaagccgaggaatatctcggatcacaagctcctggagatgct
gttatccgtccttcatcaaagggaaatgaccatctggcagttacatggaaagtcgccgat
ggcgtataccagcatcttgatgtattagagttacaaaaggagaatgagttctcacttggt
cgacaattgagaatcaacaacaaatacaactacagtgatcttgacgaattgattgtggat
catgttaaggctatgtccagaaaggttgaagagatgatgctgcatgagaaattccaaaag
ggcagcagaaccgacacggaacgttggttgacaacctacacggaggctaatcccaagcga
tctgtatatgctttctgtctcgatacgagacatcctgggtattttcatctgtgcttcaaa
gctggccaacaagcgcgcgtcaattcatgggccgtacggatcgttcccaatgcctttgaa
ttattgaagagtcaataccctgatatgaaggcattgtgtaatggattcaaactgcgccat
acggcggaaatgaatcgaagatga
DBGET
integrated database retrieval system
