Botrytis cinerea (gray mold): BCIN_04g05710
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Entry
BCIN_04g05710 CDS
T01072
Symbol
Bcrrp4
Name
(RefSeq) Bcrrp4
KO
K03679
exosome complex component RRP4
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_04g05710 (Bcrrp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_04g05710 (Bcrrp4)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BCIN_04g05710 (Bcrrp4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
BCIN_04g05710 (Bcrrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
ECR1_N_2
Ribosomal_L29
Motif
Other DBs
NCBI-GeneID:
5438321
NCBI-ProteinID:
XP_001557724
UniProt:
A0A384JFQ2
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All DBs
Position
4:complement(join(1990369..1991194,1991259..1991446))
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AA seq
337 aa
AA seq
DB search
MAITIIAPVSAAVPYHAEDESDHSDDGGVDVEGDLDMQLSKRAQHQNIVTPGEVITDDPQ
WMRGHGTYVAPASTEIIGTVAGTVQKTNKLLSVRALRARYTPEIGDLVVGRIIEVQSKRW
RVDIGAPVLANLPLSAINLPGGIQRKRTETDELQIRTFFSEGDLLVAEVQQLYQDGSASL
HTRSLKYGKLRNGVFMAVSGTGGGGGVVRARRQVWTIDTAHNGGKVDIILGVNGYIWICK
TVEVKEGETSITRIEESVSNAAYSSQNDEIIPETRREIARIKGVIQLLVEEGLRVDEDMV
NKAYAAAIEVDEEDEGESSAYVGGEIGKRVLSLISTT
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcaattactattatcgcaccagtttctgccgcggtaccctatcatgctgaagatgag
tctgatcattctgatgatggaggtgttgatgtagaaggggatcttgatatgcaactgtcc
aaacgggctcagcatcaaaatatcgttactcctggtgaagtaatcacagatgaccctcaa
tggatgagaggtcatggtacatatgtcgctcctgcaagtacagaaataatagggaccgtc
gcaggtacagttcaaaagacgaataaacttctttcggttcgagcattgcgcgcccgctat
accccagaaatcggtgatcttgttgttggacgaattatagaagtacaaagtaagaggtgg
cgtgttgatattggcgctccggttcttgccaatttgccattatctgcaatcaacctccca
ggaggaattcaaagaaagagaacggaaaccgatgaacttcaaatacgaacatttttttca
gagggagatttactagttgccgaagtccaacaattatatcaggatggaagtgccagttta
catacgagaagtttaaaatacggtaagctgaggaatggtgtcttcatggctgtcagtgga
actggtggaggtggaggtgtggttcgggctagaagacaagtttggactattgataccgca
cataatgggggaaaggtagatatcattctgggagtcaatggatacatctggatatgcaag
acggtcgaagtcaaggaaggggaaacctccatcacaagaatcgaggaaagtgttagcaac
gcagcatattcaagtcagaacgacgaaatcattcccgaaacgaggagggagattgcaaga
ataaagggagttattcaactgttggtggaagaaggactgagggtggacgaagatatggtc
aacaaagcatatgcagccgccattgaggttgacgaggaagacgagggtgaaagcagtgca
tatgtcggaggagaaataggcaaacgagtcttgagtttaataagcacaacgtga
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