Botrytis cinerea (gray mold): BCIN_04g05940
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Entry
BCIN_04g05940 CDS
T01072
Symbol
Bcski8
Name
(RefSeq) Bcski8
KO
K12601
superkiller protein 8
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_04g05940 (Bcski8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_04g05940 (Bcski8)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
BCIN_04g05940 (Bcski8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_SPT8
VID27
WDR54
Motif
Other DBs
NCBI-GeneID:
5438295
NCBI-ProteinID:
XP_024548470
UniProt:
A0A384JGG9
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Position
4:join(2040882..2040884,2040932..2040968,2041061..2041624,2041686..2042059)
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AA seq
325 aa
AA seq
DB search
MSKQYLTTHTIDDAHKTDIFSLAVTPNSILSASGTSTLKIHSTLTTPPSLTQTLPAHKLG
CHHICTSRSGTIAASAGFDGTVSIWSSSPQADGSEEWSHHGHILDGNKPGEIWALALSAD
GNFLAATTIDGKIGVWDLLQGVEEIAGKKSVGKKTREYETKGSFGLCVDISADGRFTASG
HENGGVYVFNNDTGRMVHSLPGLIQPIRTISFSPLSTYLAAAGDSTAIALYSVTHGEQVA
NMTGHTAWIFSIDWSFTGEYLVSGAWDGKVKVWSVEGRNCVATHSETDKALWAVKWLPKV
QGRSEAFVTAGANGSLSFYREATGG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaataccttacaacccatacgattgatgatgcacataaaacagacatcttt
tctctcgccgtaacccctaactctatcctctctgcctctggcacatccaccctcaagatc
cacagcacactcaccacgcctccctctctaacccagactctccccgcccataaactgggc
tgtcaccacatctgcacctctcgatctggcactatcgccgcatctgccggctttgacggt
acagttagtatatggagctcttctccccaagcagacggatcggaagaatggtctcatcat
ggccatattctcgatggcaataagcctggtgaaatctgggcactggcattgagtgctgat
ggaaatttccttgcagcaacaactattgatgggaagattggggtgtgggatttattacaa
ggagttgaagagatcgcgggaaagaaaagtgtaggcaagaaaacaagagagtatgagacg
aagggaagctttgggctatgtgtggatattagtgcggatggaagatttacagccagtgga
catgaaaatgggggtgtttatgtttttaataatgatacgggaagaatggtacatagttta
cctggactcatccaaccaattcgcaccatctccttctctcctctctctacctatctcgct
gccgccggcgactccacagctatcgctctctactctgttacccatggcgaacaagtcgct
aacatgacaggccacacagcctggattttcagcattgattggagttttacaggcgaatat
ctagttagtggtgcttgggatggtaaagtgaaggtatggagtgtcgagggaagaaactgt
gtggcgacccatagtgagacggataaagcactttgggctgtcaaatggttgccgaaagtg
caggggagaagtgaggcgtttgttacagcgggagcaaatgggagtttgagcttttataga
gaggctacaggtggttga
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integrated database retrieval system