Botrytis cinerea (gray mold): BCIN_05g00090
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Entry
BCIN_05g00090 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
bfu
Botrytis cinerea (gray mold)
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_05g00090
03041 Spliceosome [BR:
bfu03041
]
BCIN_05g00090
03036 Chromosome and associated proteins [BR:
bfu03036
]
BCIN_05g00090
Enzymes [BR:
bfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCIN_05g00090
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
BCIN_05g00090
mRNA cycle factors
Common to processing body (P body) and stress granule
BCIN_05g00090
Spliceosome [BR:
bfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
BCIN_05g00090
Chromosome and associated proteins [BR:
bfu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
BCIN_05g00090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
5430884
NCBI-ProteinID:
XP_001550389
UniProt:
A6SEH9
LinkDB
All DBs
Position
5:join(50960..51108,51178..52550,52637..53133,53209..53241)
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AA seq
683 aa
AA seq
DB search
MADQLNMNGLNLNGGEPRSYIPPHMRGKMGGPAPAGPPANLNGSAWAPQGNGYANGPRPA
GGDSWANAPDFTPRGNGAPRGGNNWNPSGPPSFNKNAYGNPAAGAGGPGGAGGAGGAGGG
AGQARGGGDGQWRDGKHIAGPANARVERELFGIADDPTKQQTGINFEKYDDIPVEASGQD
VPEPVLKFTNPPLDDHLIKNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGF
LFPILSQAFQTGPSPVPANAAGSFGRTRKAYPTSLILAPTRELVSQIYDESRKFAYRSWV
RPCVVYGGADIGSQLRQMERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDM
GFEPQIRRIVEGEDMPGVQNRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENI
TQKVEYVEDIDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRT
QRERERALEMFRNGRCPILVATAVAARGLDIPNVKHVVNYDLPTDIDDYVHRIGRTGRAG
NTGISTAFFNRGNRGVCRDLIELLKEANQEIPSFLENIAREGGGFGGGRGGRSGGRGRGG
GANRDFRKFGGGGGGGFNGGGGFGGPPASGGYGGGGGGFGGPPAPSSYGPPPGQYGGGGG
GYGGGNGGGYGNPSAGGGGQSWW
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaactcaacatgaatggtctcaaccttaacggtggtgaacctcgatcatat
attcctccccacatgcgaggcaagatgggtggccctgctccagctggtccaccagcaaac
ttgaatggcagtgcttgggcccctcaaggtaacggatacgctaatggtccacgcccagcc
ggaggtgattcttgggctaatgctcctgatttcaccccacgtggaaatggtgctccacga
ggtggaaacaactggaacccatctggtcctccatccttcaacaagaacgcttacggaaac
cctgcagctggtgctggcggtcctggaggtgcaggtggtgccggtggcgctggtggcggt
gctggtcaagctcgtggtggtggagatggacaatggcgagatggaaaacacattgctgga
cctgccaacgctcgtgtagaacgcgaactcttcggtattgcggatgatccaaccaagcaa
caaaccggtatcaacttcgaaaagtacgatgatatcccagttgaagcatctggtcaagat
gttccagaaccagtcctcaagttcactaaccctcctctcgatgatcatctcatcaagaac
atcgagttagcacattacaaggtcccaaccccagttcaaaaatactccatcccaattgtc
atgggtggacgtgatttgatggcttgtgctcaaactggttccggaaagactggtggtttc
ttgttccccattttgtctcaagcattccaaactggtccatctcctgttccagctaatgct
gcaggaagcttcggacgcactcgcaaggcttacccaacttccctgatccttgctccaact
cgtgagcttgtttcccaaatttacgacgaatctcgcaaattcgcctacagatcctgggtt
cgcccttgtgttgtttatggtggtgccgatattggctctcaacttcgccaaatggaacgc
ggttgtgatctcctcgttgctaccccaggtcgtcttgtcgatttgattgaacgtggccgc
atttctcttcaaaacatcaaatacttggttctcgatgaggctgatcgtatgttggacatg
ggtttcgaaccacaaattcgacgaattgttgagggtgaggatatgccaggtgttcaaaac
cgtcaaaccctcatgttttcagccaccttccctcgcgacattcaaatgcttgcccgtgat
ttcttgaaggattacgttttcttgtctgttggtcgtgttggttctacttctgagaacatc
actcaaaaggttgaatacgttgaggacattgacaagcgttccgtccttttagacattctc
cacactcacggtgctggtcttaccctcatcttcgtcgagactaagcgtatggccgattcc
ttgtcagacttcttgatcaaccaaaacttccccgccacttctatccacggtgatcgtact
caacgtgagcgtgagcgtgctctcgagatgttcagaaatggtcgttgcccgattcttgtc
gctactgctgtcgcagccagaggattggacattcccaatgttaagcatgtagtcaactac
gaccttcctactgacatcgatgactacgttcatcgtatcggtcgtacaggtcgtgctggt
aacactggtatctcaactgcgttcttcaaccgtggaaaccgtggtgtctgtcgcgatctt
attgaactcttgaaggaagctaaccaagagattccatccttcctcgagaatattgctcgt
gaaggtggtggttttggtggcggacgtggtggtcgatcaggtggtcgtggacgtggtggt
ggagctaaccgtgatttccgtaaatttggcggaggtggcggtggtggattcaacggaggt
ggtggatttggcggacctccagcctctggtggatatggtggtggtggtggcggcttcggt
ggcccacctgctccttctagctatggacctccaccaggacaatacggtggtggtggcggt
ggttacggcggcggaaatggtggcggttatggcaacccatctgctggtggtggcggccaa
agctggtggtaa
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