Botrytis cinerea (gray mold): BCIN_05g03980
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Entry
BCIN_05g03980 CDS
T01072
Name
(RefSeq) Bcrpb11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03020
RNA polymerase
bfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCIN_05g03980
09124 Replication and repair
03420 Nucleotide excision repair
BCIN_05g03980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfu03021
]
BCIN_05g03980
03400 DNA repair and recombination proteins [BR:
bfu03400
]
BCIN_05g03980
Transcription machinery [BR:
bfu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
BCIN_05g03980
DNA repair and recombination proteins [BR:
bfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
BCIN_05g03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
CorA
Motif
Other DBs
NCBI-GeneID:
5440475
NCBI-ProteinID:
XP_024548772
UniProt:
A0A384JHF0
LinkDB
All DBs
Position
5:join(1431256..1431275,1431356..1431414,1431479..1431589,1431678..1431865)
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AA seq
125 aa
AA seq
DB search
MSNAPERFELFILGDGEKKCTEEADTRTPNSSVFTFNKEDHTLANMLRAHLLKDPHVIFS
GYKIPHPLFSKFELRIQTDGEITPKEALVACCRNLVSELEVFSREFTKEFELRKMVSGDV
AAADK
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgcgcctgagagattcgagttatttattctcggagatggcgagaagaagtgt
actgaggaagccgatacgcgcacccccaactcttcggtttttaccttcaacaaagaagac
cacactctcgccaacatgttgcgtgctcatctgttgaaagatccgcatgttatattttct
ggctataagattcctcatcccctcttttccaaattcgaactccggatccaaactgatggt
gagataactcccaaggaggctctggtcgcctgttgccgtaacttggtatccgaactcgag
gttttcagccgcgaatttaccaaggagtttgagctacgaaagatggtcagcggtgacgtc
gcggctgccgacaaataa
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