Botrytis cinerea (gray mold): BCIN_05g06800
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Entry
BCIN_05g06800 CDS
T01072
Symbol
Bcrok1
Name
(RefSeq) Bcrok1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
bfu
Botrytis cinerea (gray mold)
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfu03009
]
BCIN_05g06800 (Bcrok1)
Enzymes [BR:
bfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCIN_05g06800 (Bcrok1)
Ribosome biogenesis [BR:
bfu03009
]
Eukaryotic type
90S particles
Helicases
BCIN_05g06800 (Bcrok1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Spt20_SEP
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
5440146
NCBI-ProteinID:
XP_001559522
UniProt:
A0A384JI92
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All DBs
Position
5:2338094..2340253
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AA seq
719 aa
AA seq
DB search
MDILRLLSRSSKQSGQNGSQKLGGVASKLPSSGTSANPQLYHDPIPESRGKKRKRGGPSQ
EADTTEQKDGDLNFFSSEPAAQKSKKITSTDDAPKPAPSNQSSEPEALLDEGECRQILKS
HRLKVTLLPCAKPQKKIKKSKKSKPAKSTKEEIKQLYPQPLTAFEDLRATYKISGRLSEN
LKDQGYKIPTEVQMGSLPLLLKPSVALSSSSVDTDELSSTLDLLAVAPTGSGKTLAFLIP
VINEIVQRRRTSDKNHDLEAVIIAPTKELASQIVNEGKKLSVGTGVKILGMKKGMKIIPS
ANTEEKDQPDDEEDDDESVEGTTSTSQPLTKTDILVTTPLIFLHALSLGSSDSHAPLPTV
RTLVFDEADVLLDPLFREQTLGIWNSCINPDLRVTLWSATMGSNIETLASATIQARQEKL
GLEKHSNLVRLVVGLKDSAIPNITHRLIYAATEPGKLIALRQLLRPTAKTTDGTESLRPP
FLVFTQTIPRAIALHAELLYDIPAEAGGSTRIAVLHSDLSDSVRDQVMTRFRNGEIWILI
TTDILSRGVDFKGINGVVNYDVPNSGAAYIHRVGRTGRAGRDGGMAVTFYTKEDIPYVKN
VANIIAASEKQAGKPASEASMQKWLLDALPTPSKEEKKKLKKYGVEARRGGLGNAKDGKD
GKDKGGKSKSRMQISTKSGYERKLENNRKGAIQGSKRRKQENVGGGGEVDDDVFEGIED
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggatattttgaggttgctttctagatcgtcgaagcagtcgggtcaaaatggatcccaa
aaactaggaggcgttgcttcgaaattaccttcgagtggaacatctgcaaatcctcaacta
taccacgatcccattcccgaatcgagaggcaagaaaagaaagagaggaggaccatctcag
gaggctgatactacggagcaaaaagatggggatctcaatttcttctcatctgaacctgcg
gcgcagaaatccaagaaaattacttccacagacgatgcgccaaaacctgcaccttcaaat
caatcctcagagccagaggcacttctagatgagggagaatgtcgacagatattaaaatcg
catcgattgaaggttactcttctgccttgcgcgaaaccgcaaaagaagattaagaagtcg
aagaagtcgaagcctgctaaaagtacaaaggaggagatcaagcagttatacccacagccc
ttgacggcgtttgaagatttacgagctacatacaagatatcaggcagactatcagaaaat
ttgaaggatcaaggatacaaaattcccacggaagttcaaatgggaagtttgccgctactt
ttgaagccttcagttgcattgagtagctcatcagtagataccgatgagttgtcgagtacc
ctggatttattggctgttgcgcctactggaagtggaaagactttggcatttttaataccg
gttattaatgagatagtacaaagacgtcgaacttctgataagaatcatgatttggaggct
gttataatagcgcctacgaaagagctcgctagtcaaattgtcaacgagggaaagaagctc
agcgttggaactggagttaagattttgggaatgaagaaagggatgaagataataccgagt
gccaataccgaggaaaaggaccagccagacgatgaggaggatgacgacgaatctgtcgag
gggactacttcaactagtcagccacttaccaagactgatatactggtcacaacacctttg
atcttccttcatgccttatccttaggatcttcagacagtcatgctccattgccgactgtt
cgtacattagttttcgatgaagcggatgtgcttcttgatccgttattcagagaacagaca
ttaggtatctggaattcatgtatcaatcctgatctaagagtcactctttggtcggcaaca
atgggttcaaatattgaaactctcgcctcggctaccatacaagccaggcaagaaaagtta
ggcctcgagaaacattcaaatcttgttcgtctcgtagtcggactcaaagattctgcaatt
cctaatatcacacatcgtttgatctacgctgcgacagaacctggtaaacttattgctctt
cgacaattgcttcgacccacagcaaaaactacagatggaacggaatctttacgacctcca
ttcctcgtctttacacaaacgatacctagagctattgctttacacgctgaactcttgtat
gatatccccgctgaagcaggtggttctaccagaatcgcagtactacattcagatctttcc
gactcggttagagatcaagtcatgacacgattccgtaatggtgagatctggatcttgatt
accacggacattttgtcccgaggtgtcgatttcaagggcatcaatggtgtggtcaactat
gatgttccaaattcaggagcagcttatattcatcgtgtaggacgtactggacgagctggc
cgtgatggtggtatggcagtgaccttttatacaaaagaggatatcccatatgttaagaac
gtcgcaaatatcatcgcagcatcagaaaaacaagctggaaaaccagcaagtgaagcgagt
atgcagaaatggttattagatgcattaccaacacctagcaaggaagaaaagaaaaagttg
aagaaatatggtgttgaagcgaggcgagggggtttgggcaatgcaaaggatgggaaggat
ggaaaggataagggagggaaatcgaaatcgagaatgcagattagtacgaagagtggttat
gagaggaagttggaaaataaccggaaaggagctattcaaggaagtaagagacgaaagcag
gaaaacgttggaggtggtggggaggtggatgatgatgtgtttgagggtattgaagattaa
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