Botrytis cinerea (gray mold): BCIN_06g02950
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Entry
BCIN_06g02950 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03013
Nucleocytoplasmic transport
bfu03015
mRNA surveillance pathway
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_06g02950
09122 Translation
03013 Nucleocytoplasmic transport
BCIN_06g02950
03015 mRNA surveillance pathway
BCIN_06g02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_06g02950
03041 Spliceosome [BR:
bfu03041
]
BCIN_06g02950
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
BCIN_06g02950
TREX complex
BCIN_06g02950
Spliceosome [BR:
bfu03041
]
Complex C
Other components
EJC/TREX
BCIN_06g02950
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
BCIN_06g02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
5436829
NCBI-ProteinID:
XP_024549217
UniProt:
A0A384JJQ2
LinkDB
All DBs
Position
6:complement(join(1024922..1025424,1025474..1025621,1025674..1025734,1025785..1025839,1025900..1025931,1025981..1026015,1026248..1026325,1026406..1026444))
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AA seq
316 aa
AA seq
DB search
MDQSLDEISGDRQQRNGGNRGRQGRRNNRNDYPRDGVRKPYQGDDSRNIDSEWVHDKYDD
RNARSSNRPERRNYEDDRPINSGKVRVENVHYDLTEEELEGLFERIGRVSFLKLDYDRAG
RSNGVAHVTYEDPRDAQRAIEEFDGANANGQPIRLRSVPDGPSRGRGGRNQYEPSRSGRS
LADRMTIPRSRSLSPPIRHSDVSKPPPENVDRYVPGDRGDRPDRRRRSRSPLPRRGRDGR
RPGARRERGDRNAGRGGERPTRESRPKKTQEELDAEMDDYFGNGSKQEDNVNDTANEAPV
AATEHNQTGDDIEMVE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagccttgatgaaattagtggtgatcgccagcagagaaatggtggaaatcga
ggtcgacaaggccgcagaaacaatcgcaatgactaccctcgtgatggtgtaagaaagcca
tatcaaggagatgattctagaaacatagactccgaatgggtacatgacaaatacgatgat
cgaaacgcccgttcttcgaatcgcccggaaagacgcaactacgaagatgacagaccaata
aacagtggaaaggttagggtggagaacgtacattacgatttgacggaagaagaattggag
ggtcttttcgagcgcattggtcgtgtttcattcttgaagcttgattatgaccgagctgga
cgttcgaatggtgtcgctcatgtaacttatgaggacccaagagatgcgcagagagccatt
gaggagtttgatggggcaaatgccaatggtcaaccaattcgtttgaggtctgtcccagac
ggtccatccagaggccgtggaggcagaaatcaatacgaaccatcgagatcaggtcgctcc
ctggccgatcgcatgactattcctcgttctcgttctttatctcctccaatcaggcattct
gatgtcagcaagccgccacctgagaatgttgatcgatatgttccgggcgaccgaggagac
cgacctgacaggaggagacgttcgcgcagtcctctgccacgccgaggaagagatggtcgc
agacctggtgcaaggagagaaagaggagatcgcaatgccggtcgtggaggagagaggcct
acaagagagagcagaccaaagaaaacacaagaagaacttgatgccgagatggacgattat
ttcggaaatggatccaaacaggaggataatgtcaatgacactgcgaatgaagccccagtt
gcagctacagagcacaatcaaactggagatgatattgaaatggttgagtag
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