Botrytis cinerea (gray mold): BCIN_06g06200
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Entry
BCIN_06g06200 CDS
T01072
Symbol
Bcsmd1
Name
(RefSeq) Bcsmd1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_06g06200 (Bcsmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfu03041
]
BCIN_06g06200 (Bcsmd1)
03032 DNA replication proteins [BR:
bfu03032
]
BCIN_06g06200 (Bcsmd1)
Spliceosome [BR:
bfu03041
]
Complex A
U1 snRNP components
Sm proteins
BCIN_06g06200 (Bcsmd1)
U2 snRNP components
BCIN_06g06200 (Bcsmd1)
Complex B
U1 snRNP components
BCIN_06g06200 (Bcsmd1)
U4/U6.U5 tri-snRNP components
BCIN_06g06200 (Bcsmd1)
Complex C
U2 snRNP components
BCIN_06g06200 (Bcsmd1)
DNA replication proteins [BR:
bfu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
BCIN_06g06200 (Bcsmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
5429722
NCBI-ProteinID:
XP_001549236
UniProt:
A0A384JLE9
LinkDB
All DBs
Position
6:join(2166231..2166244,2166356..2166405,2166476..2166825)
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AA seq
137 aa
AA seq
DB search
MKLVRFLMKCANETVTIELKNGTIIHGTITSVSPQMNTALRTVKMTPKNGTSLTLDVINL
RGSTIRYYILPDSLPLDTLLIDDAPKPKNKARKEAAGTTDTRGGRGGRGGPRGGRGGGRG
GGGGFRGGRGRGGGRGF
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttctcatgaaatgcgcgaacgaaacggtcactattgagcttaaa
aatggcacaatcattcatggtaccataacttccgtatctccacaaatgaacacagctctc
cgcaccgtcaagatgacgccaaagaatggcacatctctcacccttgatgtcattaaccta
cgaggttccacaattcgttattacattctgcccgattcgttaccgctcgacacattgttg
atagacgatgcaccaaagccaaagaacaaggcgagaaaggaagctgcaggcactaccgat
actagaggcggtagaggtggtagaggcggacctagaggtggacgaggtggaggaagagga
ggcggcggtggattcagaggaggacggggacgaggcggcggaagaggattttaa
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