Botrytis cinerea (gray mold): BCIN_07g00590
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Entry
BCIN_07g00590 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_07g00590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfu03041
]
BCIN_07g00590
Enzymes [BR:
bfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BCIN_07g00590
Spliceosome [BR:
bfu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
BCIN_07g00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
DEAD
HA2_C
AAA_22
AAA_19
T2SSE
AAA_30
Flavi_DEAD
Cas3-like_C_2
ResIII
nSTAND_NTPase5
nSTAND3
SRP54
ABC_tran
Motif
Other DBs
NCBI-GeneID:
5436555
NCBI-ProteinID:
XP_001556045
UniProt:
A0A384JLF2
LinkDB
All DBs
Position
7:complement(217522..220512)
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AA seq
996 aa
AA seq
DB search
MASKKYALLPMEEEEIGPAKVVAKRKEKKSHRESSSRRDKHRERSPRRERSPRRDTEQRS
KTIRNKANDDYEERWGDEEYISEDEPEFQEPASKRVKTVHSDDDISDSEKERRKDQAEKD
AFAQRLLSKNSDKSKTILEDRSDPIMAQRRALADDAAARRAAMPDLRERSRQEYLKKREA
ERLALLRRQVEDETRELNDPYSNLSKKEKADFAKNRELLRLADERSRIDDHRDGYAMPDD
YITEKGKLDQKKKQDALYKRYVERDEYGQEKFVSEHEEWDRQQEKLARNQIQSTERVDQG
EYDYILDEEQGIKWIMDSKLPGQGMDKEARFLGEQLKAAEQKAKTIEETRKNLPIYAYKD
EFLAALDQFQTIILVGETGSGKTTQLPQYLHEAGYTKDGMKIGVTQPRRVAAMSVAQRVS
EEMGCKIGNEVGYAIRFEDCTSDKTLIKYMTDGHLLKEVMITPSLDEYQVIMIDEAHERT
VHTDILLALLKDLAKERPTIKLLIASATINAQAFSDFFDGAPIFNVKGRSYPVEIYNTPQ
PEANYLAAAITTLFQIHTSQPSGDVLIFLTGQDEIEAAEERISDISKKLGSRVPELVICP
IYANLPTDLQTKIFEPTPKGARKVVLATNIAETSLTIDGIVYVIDPGFVKENIYNPATGM
SKLVTVACSRASANQRSGRAGRVGPGKCFRLYTKWAFMNEMEESTTPEIQRTNLNGTVLL
LKSLGINDLLTFDFMDPPPTETLIGALNQLYALSALNNRGELTKIGRQMAEFPTDPQVAK
SIIASDQLACSDEVLSIMAMLGESSALFFRPKGEQRVHADSARARFTIKEGGDHLTYLNI
WNQWVDNDFSTIWAKENFLQQRSLTRARDVRDQLAKLCERVEVTIASCGASNLEPIQKAI
TAGFFANAARLQRDGDSYRTVKRNTTVYIHPSSVLMANDPPIKLVVYHELVQTTKEYMRS
CIPIKANWLYELAPHYHKKKEIEEMGEKKLANRSRA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaaaaatacgcgcttcttcctatggaggaagaggaaataggtccagcaaaa
gtggtagcaaagaggaaagagaaaaagtcacaccgtgaaagctcctcgcggcgcgacaaa
caccgagaaaggtcacctcgtcgagaaaggtctccacgtagagatacagagcagcgctcg
aaaactatccggaataaggcgaatgatgattatgaggaacgatggggcgacgaagaatac
atttccgaggacgaacccgaatttcaggagcctgcctcaaaacgggtcaaaacagtacat
tcagatgacgatatctcggattcagaaaaagaacgaaggaaagatcaagcagagaaggat
gcttttgcgcagaggctgctgtcgaagaattccgacaaatcgaagacaatactcgaagat
agatccgatcctattatggcacagaggagagcattggccgacgatgctgctgcaagacgt
gctgcaatgccagatctaagggaaaggtcgagacaagaatacctgaagaagcgtgaagcg
gagcgtctcgctttgctgaggagacaggtcgaggatgaaacgagggagctgaatgatcct
tattccaatttatcaaagaaggagaaggcagatttcgccaagaatagagagctacttcga
ctcgctgatgagagatcaagaattgatgatcaccgtgatggctatgctatgccagacgac
tatattacagagaaagggaagctcgatcaaaagaagaaacaagatgcactatacaaacgt
tacgtcgaaagggatgaatatggccaggagaaattcgtttctgaacacgaggagtgggac
aggcaacaagaaaagctcgccagaaaccagatccaaagcacagaacgagtcgatcaaggc
gaatatgattatatcttggacgaggagcaagggattaagtggattatggattcgaagtta
ccgggtcaaggcatggataaagaagcaagattcttaggtgaacaactgaaggctgctgag
cagaaagcaaagacaattgaggagacgaggaaaaatcttccaatctatgcttacaaggac
gaatttctggctgcccttgatcagtttcagactattatccttgttggtgagacaggatct
ggcaaaactacacaactgccccagtatctacatgaagctgggtatactaaagatgggatg
aaaattggagtaacgcaacctaggagagtggctgccatgtccgttgctcaacgtgtgtca
gaggaaatgggatgcaagatcggaaacgaagttggttacgctatccgttttgaggattgt
acaagtgacaaaactctcatcaaatatatgacggatggtcatcttttgaaagaggtcatg
attacaccttctctggacgagtatcaggtgattatgattgatgaagctcacgaacggact
gtgcataccgatatacttctagctttgctcaaagatcttgccaaagaaaggccaacaatt
aaactcctgattgcttcagcgacaattaatgcacaggctttctcagacttcttcgatggc
gctcctatcttcaatgttaaagggcgtagttacccagtcgaaatttataataccccacag
ccagaagcaaattatcttgctgcagccattactacactttttcagatacatacctctcag
ccaagtggcgatgtgctgatatttctaacaggtcaagatgagattgaggcagcggaagaa
cgaataagtgatatttcaaaaaaattgggttcgagagtacccgagcttgttatttgtcct
atttacgcaaatcttccaaccgacctacaaaccaaaattttcgaaccaacacctaaagga
gcacgaaaagttgtgttggcaaccaatattgcagagacgagtttgaccattgatggcatt
gtgtatgtcatcgatccaggatttgtaaaggagaatatctataatccagcgactggaatg
tcaaagttggttacagtagcatgttcacgagcgtctgcgaatcaaagaagtggtcgtgct
ggtcgtgtaggacctgggaagtgcttccgcttgtacaccaaatgggcgtttatgaatgaa
atggaagaaagtaccactcctgaaatccagcgaacaaatctgaatggtacagttctccta
cttaagtcacttggaattaacgatctcttgacttttgactttatggaccctccaccgaca
gaaactttaattggtgctctcaaccaattgtacgcgttatctgcattgaacaaccgtggg
gaactaaccaaaattggaagacaaatggccgaattcccaacagatcctcaagttgcgaag
tctatcattgcttcagaccaactggcatgctctgacgaagtattgagcatcatggcaatg
ttaggtgaaagttcggcactatttttccgtcccaaaggagaacaaagagtgcatgcagat
agcgccagagcgcgcttcacgatcaaagaaggaggggaccacctcacctatttgaacatt
tggaatcagtgggtggacaatgatttcagcactatctgggctaaagaaaactttcttcaa
caacgttcccttactcgagctagggatgttcgagaccaacttgcaaagctctgtgaacgc
gtggaagttacaattgccagttgtggggcgtcaaatctggagcctattcaaaaagcgatt
acggcgggattcttcgctaatgcggcacgattacaacgagatggagatagctatcggaca
gtgaagagaaatactacagtgtatatacatccttcgtcagtattgatggcaaatgatccc
cctatcaagttggttgtgtatcatgaacttgtacaaactacaaaggagtacatgcgcagt
tgcattcccatcaaagcaaattggttgtatgagcttgcaccccattatcacaagaagaaa
gagatagaggagatgggagaaaagaagttggcaaatcggagcagggcatga
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