Botrytis cinerea (gray mold): BCIN_07g01280
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Entry
BCIN_07g01280 CDS
T01072
Symbol
Bcnmd2
Name
(RefSeq) Bcnmd2
KO
K14327
regulator of nonsense transcripts 2
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03013
Nucleocytoplasmic transport
bfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
BCIN_07g01280 (Bcnmd2)
03015 mRNA surveillance pathway
BCIN_07g01280 (Bcnmd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_07g01280 (Bcnmd2)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
BCIN_07g01280 (Bcnmd2)
mRNA cycle factors
P-body specific factors
BCIN_07g01280 (Bcnmd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
5431980
NCBI-ProteinID:
XP_024549631
UniProt:
A0A384JMB2
LinkDB
All DBs
Position
7:join(462328..462346,462412..462456,462512..464628,464680..464971,465024..465178,465227..465829,465885..466183,466589..466595)
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AA seq
1178 aa
AA seq
DB search
MDRRRKRELRDLNTRAWNGEKDIYAVNKSLDSSLKKNTAFIKRLRTAISAATLSTFLQEI
RTLSLHKYLSEIISACYEGLCRLKSPGEVEAGVEIVSALHQRFGPAEFTEFLGWLVGKGL
ATPEKSLLKSLAAEAREKEEKERIVRQRVLLRVVTELWLVGVLRTLDDVARPDDASHGKE
SLSGSSNKAPDTKAKPNGVGKGGGAEPFPLEVLKDLLGHDRDHANLPLLVIFVKAFGWDI
LGVREAGYEGRKTVEEDGTTKTTLDATEGEGENEDGDENDSVEETSPLVDSTEDAPLASL
ELQERFRNILNRYFEDVKAHIIRDQKAIAKQARKDSEAYVKSGQLFEDRQANYEKALKAQ
ERLVSNAQVLAESIGAEMPDLKDSDDSSALGNGGIGLVKAGDYLRGEGEGAGIWEDEDER
RFYENLVDLKGKVPGMLLEDGKKKKTDTDEQVGKKVDTSEIIPAESTAPTAKTTDDDQST
AIANKTIGAQVDALLARLPDLTNKDLIDEAAIDFCFLNSKASRNRLIKAVQEIPKGRSDL
LPSYSRLVATLGKYMPDIIKGLVDHLDQEFRSLQRRKEKEFLGQARLGNIRYLAELTKFG
VVPEHVIFHCLKVSLDDFSRMNIEIICNLLENCGRYLLRNPDMSPRMTSFLETLKRKKSV
QHIGQQERMLIENAVYYVDPPLRPTIQQKERTPIDLFIRKLVYSDMTTRNYARIIRSIRR
LHWEESEVVTILEKVLSKPGKVKYGNIYLLAIVTSALFRYHQGFVITVIDNVLEYIIVGL
EQNDFKFNQRRIAEAKYLGELYNFRMVDHPVIFDTMYRILTFGHGGPPVPGRTNPFDMPD
DFFRIRLVAILLESCGVFFSRGAAGKKLDYFLSFFQYYIYTKDPLPMDIEFIVSDVYAAT
RPQWKLASNIEEASRAFQLAMAQDQKTAGIEKVVEPEEPDSEASSDEGDAGIPEGDIDDA
SLDSEEETEIDANADNLTSPTGNESEEENFKVTRQEEEIDPEDEADFEREYAKMMAESLD
SRKFERKATFDVPLPMRRKDREVATSSELPSETTSGNGPSSGTMAFSLLTKRGNRQQTRT
VALPSDSNFAIAMKSQQAAEREEQQRIKNLVLNYDLNDGEEQDGDSALQPLLPNPNIHTF
TSGFDKNATTTFSRSDKSGSNRSGQRSRKLQLSDVDWT
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaggagaaagcgcgaactgcgcgacttaaacactcgcgcttggaatggcgag
aaagacatttatgccgtgaacaagtcactggattcatcgctcaagaagaacacagccttt
atcaagcgccttcgaaccgcaatttcagctgcgaccctcagcaccttcctacaagaaatt
cgaactcttagcctacacaaatatctctcggaaattatatcggcttgttatgaagggctt
tgcagactcaagtcgccgggagaggttgaggctggtgtagaaattgtcagcgcattacat
cagcgttttgggccggcagaatttacggagtttctgggatggttggtaggaaagggatta
gctacaccggaaaagtcattattgaagagtctcgcagccgaagcccgggagaaggaagaa
aaggagcggattgtacgacagagagtacttttgagagttgtcaccgagttgtggttggtg
ggagttttgagaacgttggacgatgttgctcgaccagatgacgcatctcacggcaaggaa
tctctttcaggatcgtcgaacaaggcaccagatactaaagcgaaaccaaacggagttgga
aaaggaggaggtgcggaaccatttcctctcgaagttctcaaggaccttctgggccatgat
agggatcatgcgaacttgcccctactggtaatctttgtaaaggcgtttggttgggacata
ctcggtgtcagagaagctggatacgagggcagaaaaactgtagaggaagacggcaccacg
aagacaacgcttgatgccaccgagggcgaaggtgagaatgaggatggcgacgagaacgat
tcggtggaagagacgtcacccttagtggactcaaccgaagatgcccctctagcttcactc
gaactccaggagcgcttccgcaacatccttaaccgctattttgaagatgtcaaggcacat
atcattcgtgatcagaaggctattgctaaacaggcccgcaaagactcagaagcatacgtc
aaatctggccaattgtttgaagaccgccaggcaaattatgaaaaggctctcaaagcgcaa
gaacgacttgtatcgaacgctcaggttctcgcggaatccattggcgcagaaatgccagat
cttaaagattccgatgactcttcggccttgggcaatggaggcattgggcttgtgaaggct
ggcgattatctgagaggagaaggcgagggcgcaggtatctgggaggacgaagatgagcgg
agattctatgaaaatctagtagatcttaaaggaaaggtcccgggtatgctcctcgaagat
ggtaaaaagaagaaaacagatacggatgagcaagtgggcaaaaaggtcgatacttccgag
atcattcccgcagagtccactgcgcccaccgcgaagaccacagatgacgaccaatccacg
gccattgccaacaaaaccattggcgcccaggtcgatgcattacttgctagactccctgat
cttacaaacaaagacctaattgacgaggctgcaattgacttctgtttcttgaactccaaa
gcttctcgcaaccgtttgatcaaagctgtgcaagagattcctaagggtcgtagtgatctt
ctgccatcatactcaagactagtagcaacactggggaagtacatgcctgatatcataaaa
ggcttggttgatcaccttgatcaagaattccgcagccttcaacgtcgcaaggaaaaagaa
ttcttaggtcaagcccgactaggaaacattcgctacttggctgagctgaccaagtttggc
gtggttcctgagcatgttatattccattgcttgaaagtcagtcttgacgacttctcacgg
atgaatattgagatcatatgcaacttgctagaaaattgtggtcgatacttacttcgcaat
ccagacatgtcccctcgaatgacatccttcttggaaacactaaaacgcaagaagtcggtc
caacatattggccaacaggagcgcatgctgatcgaaaatgccgtttactatgtagaccca
cctttgcgaccaacgatccagcaaaaggagagaacgccaattgatttattcattcgcaag
cttgtctattctgatatgactacacgaaactatgctaggattatcaggtcgattcgaaga
cttcactgggaagaatcagaggttgtcactattctcgaaaaagtcctttccaaacccgga
aaggtaaagtatggtaacatttatcttttggcaattgttacaagtgctctcttccgttat
caccaagggtttgtaatcacagtcattgacaatgtattggaatacattatcgttggtttg
gagcaaaatgattttaagttcaaccaacgtcggattgcagaagccaagtaccttggggag
ctgtacaactttcgaatggtagatcatcctgtaatattcgacacaatgtaccgtatcttg
acatttggtcatggtggaccgcctgtccctggtcgcaccaatcctttcgatatgcctgat
gactttttcaggattcgtcttgtagcaattttattagaaagttgcggagttttctttagt
cgtggcgcggcgggaaagaaacttgattacttcttgtcatttttccagtactacatttat
acgaaagatcctctacccatggacattgaatttatcgtcagtgatgtttatgcagccacc
agacctcaatggaagcttgcctcaaatatcgaagaagctagtcgtgcgttccaattggcc
atggcccaggatcaaaagactgctggcattgagaaggttgttgaaccagaagagcctgat
agtgaggcatcatcagacgaaggagatgcaggcattccggaaggagatatcgacgatgct
tccctcgattccgaagaagaaacggaaattgatgctaatgccgacaacttaacatcacca
acagggaacgaatcagaagaagaaaacttcaaagtcactcgccaggaagaagaaattgat
cctgaggatgaagccgatttcgaacgtgagtatgctaaaatgatggctgagagtctagat
tccagaaaatttgaacgaaaagcgacattcgatgttccacttcccatgagacgcaaagac
cgtgaagtcgcaacctcgagcgaattgcctagtgagactacctcaggaaatggtccatcc
agtggtacaatggcattctcacttttaacaaagcgtggcaatcgacaacagactcgaacg
gtagccctcccttcagactcaaatttcgcaatcgctatgaaatcacaacaagctgccgag
cgcgaggagcaacaacgcatcaagaatctagttctgaattatgatctcaacgatggcgaa
gaacaagatggtgactctgcactgcaacccttactccctaatcccaatattcacactttc
acttcaggtttcgataaaaatgccactacaacgttctccagatctgataagtctggtagt
aaccgtagtggacagaggtcaagaaaactacagcttagtgatgttgattggacatga
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