Botrytis cinerea (gray mold): BCIN_08g00510
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Entry
BCIN_08g00510 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_08g00510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_08g00510
Enzymes [BR:
bfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
BCIN_08g00510
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BCIN_08g00510
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BCIN_08g00510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_14
LRR_8
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
5433077
NCBI-ProteinID:
XP_024550118
UniProt:
A0A384JPL1
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Position
8:complement(join(237603..238831,238880..239930))
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AA seq
759 aa
AA seq
DB search
MADGYRYPQQNAGNFYYNQPTHHPRHLIRTGTPPNNIRSAFNTNTPSPSRTPDPQSPAPG
GYNMFNHQQGQHGRVNGAGRGAMASMMPYPHFPTHQSQHNQHHANIQQDHNAHNSNGVNH
HANFPSVGMQNSASTFTPNLQNGHTANAHSAQAQVMNEHWQKQLDLYAEGKKAKQSGAHY
FARSKAGENTVDKATTISTEEESENASRNRPSNTDTIKRQDWHNMDMSGLGLRALSVEVF
HYTFLQELYVASNALTSIPSAIGQLRHLRHLDASNNALQTLPPELGMCVYLKNLLLFDNQ
LTSLPQSFGSLYQLEMLGIEGNKQMDPAIKSEIMEKGTKALIHTLKEEAPIPPPPAPREM
IDLLNGTTVAPDIERFTVFSYNILCDNYVGPGQYGYVPSKALDWEHRRHEILCEIEERDA
DFVCLQEVDAENFREFFSVKLAYKDYKGVWWPKSRAKTMSESAAKAVDGCATFYKNNKFI
LLDKQLIDFANIAINRPDMKNQHDIFNRVMPRDHIAVLAFFENRLTGSRVIVANAHIFWD
PAYADVKLIQIAILMESISKFADKYQRFPACKDKKAYTIADDSDPDTPVEVAPEPAPSME
YTNKTQIPLIVCGDLNSTSDSSVYELLATGRVAPDHPDLGNYQYGNFTRDGIEHPFSLRS
AYSNLADGPQELTWTNYTPGFTDHIDHIWYSTNALENTDLLGPVDEEYMRTVPGLPHYHF
PSDHLALLARFNVKMPKTKKPHQDPPDFGPSSHHDRRRD
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggttacagatatccacagcagaacgctgggaacttttattacaatcaacct
acacaccatccgagacatttgatacgcactgggacacctccaaataacattcgatccgcc
ttcaacacgaatactccctccccaagtcgaactcccgatcctcaatctcccgctcccggt
ggttacaatatgtttaaccatcaacaaggacaacatggccgtgtcaatggcgcaggacga
ggcgctatggcaagcatgatgccatatcctcacttccctacgcatcagtctcaacacaat
caacaccatgccaatattcaacaagaccataatgcacacaattctaacggggtaaaccat
catgcgaactttccctctgttggcatgcagaattcggcttccactttcacgccaaaccta
caaaatggacacacggcaaatgcacatagtgcccaggctcaggtaatgaatgaacactgg
cagaaacaattggatttgtatgcggaaggaaagaaagcaaaacagagtggtgcgcattat
tttgctagatctaaagcaggggaaaatactgtcgacaaagccacaacgatatcaaccgag
gaagaatcagagaatgcgagtcgaaacaggccttcgaacacggatactattaagcgtcaa
gattggcataatatggatatgagtggtcttggactacgagcattgtcagttgaagtattc
cactatactttcctgcaagagttatacgtggcatccaatgccctcacatctataccttca
gccattggccaattgcgacaccttcgtcatcttgatgcctcaaacaatgcattgcagact
ctaccccccgaattaggcatgtgtgtgtatctgaagaatttactactgttcgataatcaa
cttacgtcattaccacaatcatttggatcactctatcaactcgagatgttaggcattgaa
ggcaataagcaaatggatcctgccattaaaagtgaaatcatggagaaggggactaaagct
cttattcatactcttaaagaagaagccccaatacctcctcctcccgcccctagagaaatg
attgatctactgaatggtacaacggttgcccctgatatcgagcggtttactgttttctct
tataacattctatgtgataactatgtgggtcctggccaatatggttatgttccatctaaa
gcattagattgggagcatcgaaggcacgagatactatgcgaaatcgaagaacgagatgca
gactttgtatgtctccaagaagtggatgctgaaaacttccgcgaattttttagtgtgaaa
cttgcatacaaagactataaaggtgtatggtggccaaagtcacgagcaaaaactatgtca
gagtcagctgcaaaggctgtcgatggctgtgcaaccttctataagaataacaaattcatt
cttctcgataagcaacttatcgattttgcaaacatcgcaatcaacagaccggatatgaaa
aatcaacatgacattttcaatcgagtcatgcctagggatcacatcgcagtgttggctttc
ttcgagaaccgcctcactggatcacgcgttattgttgccaatgcacacatattctgggac
ccagcgtatgctgatgttaaactaatccagatcgcaattctaatggagagcatcagcaaa
tttgctgacaaatatcaacgattcccagcatgcaaagataaaaaggcgtacaccattgca
gacgattcagatcctgatactcctgtggaagttgctccagaacctgccccatccatggaa
tatacgaacaagacccaaataccgcttattgtttgtggtgatttaaattccacttcagat
tctagtgtgtacgagttgttagctaccggaagagttgccccagatcatccagacctgggc
aactatcaatatggaaatttcacgagagatggaattgaacaccccttctcccttcgatcc
gcctattccaacttagctgatggtccacaagaattgacatggaccaattacacacccggc
ttcactgatcacattgatcatatttggtactcgactaacgctctcgaaaataccgatttg
ttgggacctgtagatgaagagtacatgagaacagtgcccggtttaccacactaccatttc
cctagtgatcatctagcactcttagcccgattcaatgtcaagatgccaaaaaccaagaaa
ccccatcaagatccacctgatttcggtccgtcgagtcaccatgatcgacgaagagattag
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