Botrytis cinerea (gray mold): BCIN_08g04680
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Entry
BCIN_08g04680 CDS
T01072
Symbol
Bcswd2
Name
(RefSeq) Bcswd2
KO
K14962
COMPASS component SWD2
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BCIN_08g04680 (Bcswd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_08g04680 (Bcswd2)
03036 Chromosome and associated proteins [BR:
bfu03036
]
BCIN_08g04680 (Bcswd2)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
BCIN_08g04680 (Bcswd2)
Chromosome and associated proteins [BR:
bfu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
BCIN_08g04680 (Bcswd2)
COMPASS/SET1 complex (yeast)
BCIN_08g04680 (Bcswd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
B-prop_COPA_B_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
ColG_sub
Motif
Other DBs
NCBI-GeneID:
5432865
NCBI-ProteinID:
XP_024550457
UniProt:
A0A384JQS2
LinkDB
All DBs
Position
8:join(1792944..1793078,1793125..1793374,1793421..1794211)
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AA seq
391 aa
AA seq
DB search
MSSTPMAIDSPLGANGTSMLKANGVSSVPQTGKLTEMISLYHPVKLFKHPPTPADKGQTP
PSYNFIQSINFNDNGSQLITSETDNTMQIYDVLEGRHSKMNISAKYGCNHAMFGHAEHCI
IHSSTKKDHKIRYLSAHDNSYIRYFEGHEQNVTCLSLHPGQDNFISCSEDNTLRIWDAAS
NNPSGILNLTGVHLVAWDPSGNVFAAASPLAQTILLYDFRNFDKEPFATFDILPYCQEFS
PQAIGRGWNKLAFSNDGKHLLLGTTGNGHFLLDAFDGHLKAFLRRNRGGARRLGAGDHNP
DNLDPSSSEYLHTTAGDCCFTPDGRYVISGSRGKNVLVWDTLAATTNRVLSPLHELDYPG
ETAIVAFNPKYNHFATADQEVLFWVPNTDML
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaacccctatggcgatagactctccattaggtgcgaatggtacttccatgttg
aaagcaaacggagtctcatcagtcccacagactggcaaactgactgagatgatctcatta
taccatccagtcaagcttttcaaacatcctccgacacctgcagacaaagggcaaactcct
ccgagttacaactttattcagtctatcaatttcaatgacaatggcagtcagcttatcacg
tcagaaactgataacactatgcaaatatatgatgttctcgaaggaagacattcaaaaatg
aatattagtgccaagtatggttgtaaccatgcaatgtttggccatgctgaacattgtata
atccattctagtaccaaaaaagaccacaagatacgttatctatctgctcatgacaattct
tatattcgttactttgaaggtcatgaacaaaatgtcacatgtctatcccttcatcccggc
caagataattttatttcatgctctgaagacaacactcttaggatctgggacgcagcttcc
aacaatccttctggtattctgaatcttactggtgttcatctcgttgcgtgggacccttcc
ggaaacgtctttgcagctgcttccccactagctcaaacaattttactctacgacttccgc
aattttgacaaggaaccgtttgctacttttgatatattaccatattgccaagaattttcc
cctcaagcaattggaagagggtggaacaaattggcgttttcgaatgatgggaagcacttg
ttactcggcacgactggcaatgggcatttcttactagatgcatttgatgggcatctgaag
gcattcttgaggaggaatagaggtggcgccagaagactaggagctggcgatcacaaccca
gataatttggatccttcatcaagtgaatacctccacaccactgccggagattgctgtttt
actcctgatggaagatatgtaattagtggatctcgaggaaagaatgtcttggtatgggac
acccttgcggctacaacaaatcgggtcctcagtcctttgcatgaattggattacccaggc
gaaacggcaattgttgcttttaaccccaagtacaaccattttgctacagcagatcaagaa
gttctgttttgggttccgaatacagatatgctctga
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