Botrytis cinerea (gray mold): BCIN_09g02580
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Entry
BCIN_09g02580 CDS
T01072
Name
(RefSeq) Bcrad28
KO
K10570
DNA excision repair protein ERCC-8
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03420
Nucleotide excision repair
bfu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
BCIN_09g02580
09124 Replication and repair
03420 Nucleotide excision repair
BCIN_09g02580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfu04121
]
BCIN_09g02580
03400 DNA repair and recombination proteins [BR:
bfu03400
]
BCIN_09g02580
Ubiquitin system [BR:
bfu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
BCIN_09g02580
DNA repair and recombination proteins [BR:
bfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
BCIN_09g02580
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Gene cluster
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Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_RIG_1st
Beta-prop_WDR11_2nd
Beta-prop_DCAF12
Kelch_2
Motif
Other DBs
NCBI-GeneID:
5435062
NCBI-ProteinID:
XP_001554529
UniProt:
A0A384JSR3
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All DBs
Position
9:join(931644..931885,931947..932051,932117..933155)
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AA seq
461 aa
AA seq
DB search
MNQLIFDRSTGNLGPNAFARIQTTQLIQAILPAPKVKFNGGEKPPTTVASGTEARDYEPA
KVWAHQTGVNALSIDRFDGKILLSGGADASIKVWNLDQIPTGASEYTFRPTGIVPRSASA
HQYGITHLSFYPFDSAAFLSSSYDHHLKLYSTETLQLSADFNLDSVVYSHAVSPIAQHLL
VACATQHPAVRLVDLRSGASTHSLAGHHGAILSVAWHPNVEHILASGCVDGTIRVWDVRK
SSGAVGSLDLEDAIGITTTHGMAGGRSRASAKAHTGAVNGLTWTDNGNYIVSAAHDERVR
VWDAATGANTLASFGPTIKNGHLSSLPIVVSPTALTRPMKELLFFPNEKEILVFELHEGR
LLKRLKVPGPPVAAVRSRTGERNIRNRITALAWREPVDGIYSAHSDGQIRAWIPRTEEDI
QMDREEEEEGKIHDEDEGGKRKRNILDDVFRDLTRQKISFG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaattgatctttgatcgatcaacgggcaatcttggcccaaatgcctttgctcgc
attcaaactacccaattaattcaggcaatcttacccgccccaaaggtaaaattcaatggt
ggtgaaaagcctccgacgactgtagcttcaggtacggaagctcgagattacgagccagcg
aaggtatgggcgcaccaaactggagtaaacgccttgtcaatagatagatttgatggaaag
attcttctttctggtggtgcagatgcatcgatcaaagtttggaatcttgatcaaatcccc
accggggcatcagaatatacattccgaccaaccggaatagtccccaggagtgcttccgcg
catcaatatggcattacacatcttagtttctatcctttcgattctgctgcgtttctctct
tcgtcgtacgatcatcacctaaaactatactccacggagactctccaactatctgcagac
ttcaatctagactctgtagtctattcgcatgccgtatctcccattgcacaacatcttttg
gtggcttgtgcaactcaacatccagctgtcaggctcgtagatcttcggtccggcgcaagt
acacattcattagctgggcatcatggggctatcctctcggttgcttggcatccaaatgtt
gagcatatactagctagtggttgtgtagacggtacgattcgtgtctgggatgttcgaaag
agttctggtgcagtgggttcgctggacttggaagatgcaattgggattacaactacacat
gggatggcaggtggtcgatcaagagcatctgccaaggctcataccggagctgtcaacggt
cttacgtggacggataatgggaactatatcgtatctgcagcacacgatgaacgggttcga
gtctgggatgcagctacgggtgctaatactctcgcaagctttggtccaacaatcaagaat
ggtcatctctcaagtctacctatagtagtgtcgcccacagcattaacacgccccatgaaa
gaacttctattcttccccaacgaaaaagaaattcttgttttcgaacttcatgaaggacgt
cttctcaagcgactcaaagttcctggcccccctgtagcagcagtacgatctcgaaccggt
gaacgaaatatccgaaaccgtatcacggcactagcgtggagggagccagtagatggtata
tattccgctcattcagatggacagattagagcttggatacctaggactgaagaagacatt
caaatggatcgtgaggaagaggaggaaggcaagattcatgatgaggatgaaggggggaag
aggaagagaaatattctcgatgatgtgtttagggatttgacaagacagaaaataagtttt
ggttag
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