Botrytis cinerea (gray mold): BCIN_09g05430
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Entry
BCIN_09g05430 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_09g05430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_09g05430
03012 Translation factors [BR:
bfu03012
]
BCIN_09g05430
Enzymes [BR:
bfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BCIN_09g05430
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
BCIN_09g05430
Translation factors [BR:
bfu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
BCIN_09g05430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
AAA_19
AAA_22
WHD_HA2
nSTAND3
T2SSE
AAA_30
nSTAND_NTPase5
Myotub-related
SRP54
Motif
Other DBs
NCBI-GeneID:
5426653
NCBI-ProteinID:
XP_024551023
UniProt:
A0A384JTQ3
LinkDB
All DBs
Position
9:join(1897662..1897703,1897757..1898128,1898182..1900610,1900661..1902107)
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AA seq
1429 aa
AA seq
DB search
MYFVYQNSGIGLINSPTTSNWLFEIPPESTSPSKLGVPLPPIAVFSKDTIDWKAVEKIFI
KRPKLAKSLIGHGDTGFSTVAFLASLNAAILCKAHCVFEYESHSYFATDGQRLLTKCSLN
FNPPDESPLNTVGLSTKKWLARGVALLQILPILEEKQLLDDLLSLISPKWVSETEQEKPV
HDVQSTQTQPIMPIAPTETKSIPDASLKPKEEPPVEPNSKLTKKPKVLTPNHVATREVFN
YAAKYLHVPEYTLTYQKVSKKELSNNPATSKKPTTPKTSFTVTISLPEHSIYATATSFDL
PLTEATACAEFKMETEKHHIANNIPSHSLEGPILLTTANVRNFMDFYNDYNDKVVIRIDR
KGDLFKSQAFIRNSNTAALETLGPILERSSSRDLETLTLLVAAVTIVKQKPQLLLDYLRS
LDGRIGKYVGKALPMELELHQSSLSLMQRTVETTTKLNSSTLRTDEFMDHGVPPLMDYRE
NSFKYSYGWRFKQRSRDLSKWFYKRSHKQQYSKLLPLKQSSSEVLNHIESNQFSILIGKT
GSGKTTQLSQIILDDYIRTKRGGKCRVICTQPRRIAAKSVAERVAEERGQKLGDQVGYKI
GFDARLPKPCGSITYCTTGIILQQLIHHPDAILDNTSHLIIDEVHERDLDIDFLLTMVKK
LVKERIETGKPTPKVCLMSATADAEMLQEYFAFKDGIREITCPVLHVEGRAFPVEKYYLE
NILDTFRETYPTGHPIWDLLDSNKNKVYLKSEERVKKTDLIMNIENEQPKSVIKWDSHED
DPDSLQNQIVMDTLEGQLPIDLAAIMIAHIASTTENGAILVFLPGIRGINIIENNLKAQC
VFDTNFNDENKFKILKLHSSTADKHQEAFKPVSPGCRKIILATNVAETSITIDDIQYVVD
TGKHKEENFHQMLRIWSLPSKWISKSSVKQRSGRAGRVQNGSYYGLFSKRRYDSLRKTPR
SGMSRVDLQSTCLAVKILGYNESIQDFLASAPEPPSPKAIQSSIEDLQTLGALTSTEKIN
PLGRLIGILPLRPPLGKIVILGILFRCLDSMIILAALDNIILQVRPLEMEDESDAAMRGF
ARTSKSDHVAVLNAFRALRHLEEVDGREVMTSFAYQKFLSVASYDIVKRNITLIQQALRR
NISVLNQETQGVAELGQKFGGEILNENSDQDELIRALLVQGLYPHIGAWNNYETKYQIVA
NEKVFVDVHPSSINHPSQRPNLKVEGIASLSKGNAQLLSFDKLTLLSNKNLVMQRTTAVT
PFMVSLFGGTLNRSADDAEQVEVDKWLRFNVRSIDKLRGAEGVAGQTLIHFNKALRQLEN
YFFHKLANGEYVVDDKLSRDFAKALKGMLITEQDINRVVEEDELDLAMDLRKFWNRSKSP
LDEIPPKESKESVPKISLLEEIEHDEEDSYGSFLELVESALEGPITTKL
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcgtgtaccaaaacagtggaatcggactcatcaattctcctactacgagtaat
tggttatttgaaattcctccagaatccacttcaccaagcaaacttggagtgcctcttcca
cctatagctgtcttttcgaaagatacgattgactggaaagctgtagaaaaaatcttcatt
aaacgcccgaaattagctaaaagtcttattggacatggtgataccggattcagtacggtt
gctttccttgcttctctgaatgcggccatattgtgtaaagcgcactgtgttttcgaatat
gaaagccatagttattttgcaacggatggccagagacttctcacaaaatgcagccttaat
ttcaaccctcctgatgaatctcctttaaatactgttggtttatcaaccaaaaagtggtta
gccagaggagttgcacttttgcaaattttgcccattcttgaagaaaaacaactattagat
gacttgttatccctcatctcaccaaagtgggtttccgaaacggaacaagagaagccggtt
catgatgttcaatccacacaaactcaaccgataatgccaatcgcgccaacagagacaaaa
tcaattccagatgcctcattaaaacccaaagaagaaccaccggtagagccgaactcaaag
ttaacaaaaaaaccgaaggtgctcacaccaaatcatgttgccacgcgtgaggttttcaat
tatgcagcaaaatatctacatgtcccggaatacactctcacttaccaaaaagtttctaaa
aaagaactctcgaacaatcccgctacatcaaaaaagcctacaactccaaaaacgagtttc
actgtcaccatatctttgcctgaacatagtatctatgcaaccgcaactagcttcgacctc
ccgctcacggaggctacggcttgtgcagagttcaaaatggaaactgagaagcaccatatt
gcaaacaacataccttctcattcattggaaggaccaatccttttaactaccgcaaatgtg
agaaatttcatggatttttacaatgactacaatgacaaagtagtcattcggatagatcgc
aagggtgatcttttcaagagtcaagcctttatcaggaattctaatactgctgctcttgaa
acacttggtccgatccttgagagaagcagttctcgtgacctcgaaacgttgactctccta
gttgctgcagtcacaatagtcaagcaaaagcctcaattactcttggattatctgagaagt
ctggatggaagaattggaaaatacgtgggaaaagctcttcctatggagctcgaactacac
cagagtagtctgagcttaatgcaacgcacggtagaaacaaccacaaagctaaattcatca
acactacgtactgacgaattcatggaccatggtgttcctcccttgatggattatcgcgaa
aactccttcaagtattcttatggctggagatttaaacaacgttcccgcgatttatcgaag
tggttttataaacgttcgcacaaacagcaatactcgaagttgcttcctttaaagcaaagt
tcgtctgaagtattgaatcacattgaaagtaatcaattctctattttgatcggaaagaca
gggagtggaaagacgactcaattgtctcaaatcattttggatgactatattcgtacaaaa
cgtggcggaaaatgtagggtcatctgtacgcaaccgcgaagaatagccgcgaagtcagtg
gcagaacgtgttgctgaagaacgtggccaaaaattgggtgatcaagtcggttacaagata
ggctttgatgctagactccccaaaccttgcggaagcatcacatattgtaccacaggaatc
atcttgcaacaattaatacaccatccggatgctatacttgacaacacatcacatcttatt
attgatgaagtacatgagagagatcttgatatcgactttcttttgacaatggttaaaaag
cttgtgaaagagagaattgaaaccggaaaacccacaccaaaagtgtgcttgatgagtgcc
accgccgacgccgagatgcttcaagaatatttcgctttcaaagatggaatccgagaaatt
acctgcccagttctgcatgtggaaggtcgagctttccctgtcgaaaaatattatctcgaa
aacatattggatactttcagagaaacatatccaacaggtcatcctatctgggatcttctc
gactcaaacaagaataaagtttatttgaaaagtgaagagcgagtcaagaaaactgattta
atcatgaacattgagaacgagcagcctaaatcggtgatcaagtgggacagccatgaagat
gatcccgatagtctacaaaaccagattgtaatggacactttggaggggcaattacctatt
gatctggctgctattatgattgcgcacatagcgagcactacagaaaatggcgcgatacta
gttttcctgccaggcatacgaggtatcaatatcattgaaaacaatctgaaggcgcaatgt
gtttttgatacaaacttcaatgacgaaaataagttcaagatcttgaaattacactcgtct
actgcagataaacaccaagaagccttcaagccagtttctccaggctgtcgaaagatcatt
ctagccacaaatgttgctgaaacctcgattactatcgacgatattcaatatgttgtggat
actggaaaacacaaggaagaaaattttcatcaaatgttacgaatttggtcgctgccttcc
aaatggattagcaagtcaagtgtgaaacagaggtcaggtcgagcaggtcgtgttcaaaac
ggtagttattatggtctcttttcaaaacgtcgctatgattcacttagaaaaactcctcgt
tcaggaatgagtcgcgtcgatttgcagagcacctgtctcgcagttaaaattctcggttac
aatgaatctattcaggatttcttagcgagcgctccagagcctccgtcaccgaaagcaata
cagtcaagcattgaggatcttcaaacacttggggcactcacctctacagaaaaaataaat
cctctaggtagattgattggaatactacctctgagacccccacttggcaaaatcgtaatc
ctcggaatactttttcgctgtctagattcaatgataattttagcagccttggacaatatc
atacttcaagtacgtccactagagatggaagatgaatccgatgcggcaatgagaggattt
gcaaggacatccaaaagcgatcatgtcgccgtgctcaatgctttccgtgcgctgcgccat
ctggaagaagttgatggtcgcgaagtcatgacctcatttgcataccagaaatttcttagt
gtggcaagttatgatatagtaaagcgaaacataactttaatccaacaagcgcttcgaaga
aatatttcagtgctaaaccaagaaactcaaggcgtggccgaacttggtcaaaagtttggc
ggagagatactgaatgagaactcagatcaggatgaattaataagagcacttcttgtacaa
ggcttgtatccccacattggtgcatggaataattacgaaaccaaatatcaaattgtcgcc
aacgagaaagtattcgtcgatgtacatccgtcttctatcaatcacccttcacagcggcct
aacttgaaggttgaaggcatcgcatctttatcaaaaggcaatgcccagctgttatccttt
gataagctcactctcttaagcaataaaaaccttgttatgcaacgcacaactgctgtaacg
ccttttatggtatctttattcggcgggacgctgaatcggagtgcagatgacgcagaacag
gtcgaagtagataagtggcttcgattcaatgtgcggagtatagacaaattgagaggcgca
gagggtgttgcgggacaaaccctcatacatttcaacaaggcattgcgacagctagagaat
tatttttttcacaaattggccaatggtgaatacgtggtggatgacaaattgtctcgtgat
ttcgcaaaagctttgaagggaatgttgatcacggaacaggatatcaatagagttgtagaa
gaggacgaactcgaccttgctatggacctacgcaagttttggaatcgatccaaatctcca
cttgatgagataccaccaaaggagtccaaggagtccgtgccaaagatctcactactcgaa
gaaatagaacatgatgaagaagattcttacggatcttttttggaattagtggaaagtgcc
ttggaaggacccatcaccactaaactttaa
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