Botrytis cinerea (gray mold): BCIN_09g06830
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Entry
BCIN_09g06830 CDS
T01072
Symbol
Bcpan3
Name
(RefSeq) Bcpan3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_09g06830 (Bcpan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_09g06830 (Bcpan3)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BCIN_09g06830 (Bcpan3)
mRNA degradation factors
3'-5' decay
Pan complex
BCIN_09g06830 (Bcpan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
5433787
NCBI-ProteinID:
XP_024551120
UniProt:
A0A384JTL5
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All DBs
Position
9:join(2408184..2408253,2408325..2408442,2409687..2409918,2410021..2410357,2410404..2410565,2410618..2411663)
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AA seq
654 aa
AA seq
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MAATRFNQPELRRPTSSPRPKGRENAKDTLCRNVLIYGHCRYEDQGCAFNHDPNKGLGGI
IDQPKKALNVDSPSFTPATISSSNKGASSITSQAANAAPFTPRGLTSGTATPNAPLDPEI
PQFNPTQRDFTPQNYDLSQTLPTNGATPEATYDPFSMGSVSQTIPTTFQNHYSEDLGILA
GPGVGTGGAGGTYFQGQPNYSVQPLNYHFYAPIGPHTDNLTPYQKSIHDLFLSDRLREEL
QRKSEAYHQAMPNALPTIGTSPNSYHSLVALDTTQNRSTAVFGCTSWVYKAMAEKNGKFC
CLRRLEGYTLANDKAIRAIKKWNEVNSAGVVSFIDAFTTRQFKDGSSLIIVTNYHPLSKT
LLEVHFSTTNTSRYRNQLPRISEDILWAYIVQITVAIKAVHQANFAVRCMHLSKVILTEK
NRIRLNACPIFDILHYEQRRDIKELQYEDLHLFGILMLSLATVNASITPQTNPQVLQTNI
DSLSRIYSAELVDTIMWLLTTPSSPETKDLQTFIRGISGRMATAFDSSLQANDELTSDLG
RELENARLVRLMAKLGNINERPEYENNPQWSETGNQYTLKLFRDYVFHSVDPEGRPVTDM
AWIIKCLNKLDAGSDEKIQLTSRDGENCFIVSFKEIKKQVNTAWGDLQKPGKRF
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacaagattcaatcaacccgaacttcgcagaccgacgagttctccgaggccg
aaaggacgtgaaaatgcaaaggatacactatgtcgaaatgttctgatatatgggcattgt
cgttatgaggatcaaggttgtgccttcaatcatgatcccaacaagggacttggaggaata
atcgatcagccaaagaaagcattaaacgtagattcgccttcttttacaccagcaaccata
tcctcgtccaataaaggagcatcttcaataacttcgcaagctgcaaatgcggctccattc
actccccgaggacttacgagtgggactgctacacctaatgcaccactcgatccagaaata
cctcaattcaatccaacacaaagagacttcactccacagaactacgatctctctcaaact
ctacccaccaacggtgccacacctgaagctacttatgatcctttttcaatgggaagtgtc
tctcaaacgattccaaccacttttcagaaccattattcggaagaccttggcattttagca
ggaccaggtgtgggaacgggaggagcaggtggaacctactttcaaggacaaccaaactat
agcgtccagcctttgaattaccacttttatgctccgattggtccacatacggataacttg
acaccttatcaaaaatctatccatgatcttttcctatccgacaggcttcgtgaagagctt
caaagaaagtctgaagcttatcatcaagcaatgccaaatgcccttccgactattggtaca
tcaccgaattcataccattctctcgtcgctttagacacaacccagaataggagcaccgct
gtttttggttgcacaagttgggtatacaaagcgatggcagaaaagaatggcaaattttgc
tgcttgagacgactagaaggttatactcttgccaatgataaagctattcgagccatcaag
aaatggaacgaagtcaatagtgcgggtgtagtatcattcattgatgcttttactacgcga
caattcaaagatggcagttcattaataattgtcacaaattatcatccactttcaaaaact
cttttagaggttcacttttccaccacaaatacaagtcgttatagaaatcaacttcctcga
atatctgaagacattctttgggcatacattgtacaaatcacagttgcaatcaaggctgtc
catcaggctaattttgctgtacgatgtatgcatttgagtaaagttattcttacagaaaaa
aatcgaattcgtcttaatgcatgtcccattttcgacatcctacattacgaacaacgtcgc
gatatcaaggaacttcaatatgaagatttacatttattcggcatacttatgttatcctta
gccacagtcaatgcatcaatcacacctcaaactaaccctcaagttttgcaaaccaatatc
gatagccttagccgaatttattctgcagaacttgtcgatacaataatgtggcttctcaca
acgccttcttccccggagactaaagatttgcaaactttcatacgaggaatttccggccgc
atggccactgccttcgatagctccctccaagcgaatgacgaattaacctccgacctcggt
cgcgagctcgagaatgctcgactcgttcgcttaatggctaaacttggcaatatcaatgaa
agaccagaatacgaaaataaccctcaatggagcgaaactggaaatcaatacacgttgaaa
cttttcagagattatgtgtttcattcggttgatccagaaggaaggccagtcacggatatg
gcgtggattataaagtgtttaaataaattagatgcggggagtgatgagaagattcaattg
acaagtagagatggggaaaattgctttattgttagtttcaaggagattaagaaacaagtc
aatactgcttggggagatttgcagaagccggggaagaggttctag
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