Botrytis cinerea (gray mold): BCIN_09g07050
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Entry
BCIN_09g07050 CDS
T01072
Symbol
Bclsm7
Name
(RefSeq) Bclsm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03018
RNA degradation
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_09g07050 (Bclsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_09g07050 (Bclsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_09g07050 (Bclsm7)
03041 Spliceosome [BR:
bfu03041
]
BCIN_09g07050 (Bclsm7)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BCIN_09g07050 (Bclsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
BCIN_09g07050 (Bclsm7)
Spliceosome [BR:
bfu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
BCIN_09g07050 (Bclsm7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
5425519
NCBI-ProteinID:
XP_001545066
UniProt:
A0A384JTP1
LinkDB
All DBs
Position
9:complement(join(2483829..2483956,2484011..2484082,2484139..2484361))
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AA seq
140 aa
AA seq
DB search
MSERGQGQHRGGGRGGGRGHGEHRGGRGAGRGGHGGERGGHGGGNFEKPKKENILDLGKY
MDKQVTVKFNGGRHVKGTLKGYDALMNLVLDDVEEKLTDDEGTEAWRSLGLVVARGTLLI
GISPVDGSEEIANPFVQQEE
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaggggtcaaggtcaacacagaggtggcggacgtggaggtggtagaggtcat
ggtgaacacagaggtggcaggggagctggtagaggaggtcatggtggggagaggggtgga
catggcgggggaaattttgagaaaccaaagaaagagaatatcttggacctgggaaagtac
atggataagcaggtcacagtcaagttcaatggtggcagacatgtgaaaggcacattgaag
ggttatgatgctctgatgaatttggtattggatgatgtggaggagaagctaactgatgat
gaaggaacagaagcttggaggtcattgggcttagtggttgcaagaggaaccttactcatt
ggaataagtccagttgatggtagcgaagaaattgcgaatcctttcgtacaacaagaagaa
tga
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