Botrytis cinerea (gray mold): BCIN_10g03340
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Entry
BCIN_10g03340 CDS
T01072
Symbol
Bcrse1
Name
(RefSeq) Bcrse1
KO
K12830
splicing factor 3B subunit 3
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_10g03340 (Bcrse1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfu03021
]
BCIN_10g03340 (Bcrse1)
03041 Spliceosome [BR:
bfu03041
]
BCIN_10g03340 (Bcrse1)
03036 Chromosome and associated proteins [BR:
bfu03036
]
BCIN_10g03340 (Bcrse1)
Transcription machinery [BR:
bfu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
BCIN_10g03340 (Bcrse1)
Spliceosome [BR:
bfu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
BCIN_10g03340 (Bcrse1)
Complex B
BCIN_10g03340 (Bcrse1)
Complex C
U2 SnRNP specific factors
BCIN_10g03340 (Bcrse1)
Chromosome and associated proteins [BR:
bfu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
BCIN_10g03340 (Bcrse1)
TFTC complex
BCIN_10g03340 (Bcrse1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
5428512
NCBI-ProteinID:
XP_024551352
UniProt:
A0A384JUP9
LinkDB
All DBs
Position
10:join(1268818..1269061,1269213..1271295,1271489..1272773,1272828..1272854)
Genome browser
AA seq
1212 aa
AA seq
DB search
MATTSNQFLYSLTINPPTAITQAILGQFAGTKEQQIVTASGSRLTLHRPDPSQGKIITAL
SHDVFGIIRAIAAFRLAGSNKDYIIITSDSGRITIVEFVPAQNKFNRLHLETFGKSGVRR
VVPGQYLAVDPKGRACLTASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTLVFALVALD
VGYANPVFAALEIDYGESDQDPTGQAYDEIEKQLVYYELDLGLNHVVRKWSEPVDRTANI
LFQVPGGTDGPSGVLVCGEDNITYRHSNQEAFRVAIPRRRGATEDPQRKRNIVAGVMHKL
KGAAGAFFFLLQTDDGDLFKITIEMVEDDNGQPTGEVRRLKIKYFDTVPVATSLCILKSG
FLFVASEFGNHQFYQFEKLGDDDEETEFVSDDFPTGAHESYTPIYFHPRPAENLSLVESI
DSMNPLMDCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPGVPSAVWT
TKLTRGDTYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHP
KGIRHIRADHRVNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDSDGSLAEYDEKK
EMSGTVTCLSLGEVPEGRQRSQFLAVGCDDSTVRILSLDPDSTLENKSVQALTSPPNALS
IMAMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVAVQGQ
TAVLALSSRPWLGYSDPVTKGFMLTPLDYPALEWGWNFSSEQCTEGMVGIQGQNLRIFSI
EKLTDNLLQESIPLTYTPRRFVRHPEHACFYVIEADNNILSPATKQKLLEDPSVTNGDAT
VLPPEEFGYPRGTNHWASCISVVDPVTEKKVLSTIHLEDNECAVSIAVVAFASQEDETFL
CVGTGKDMVVSPRSFSAGFIHVYRFHEDGKELEFIHKTKVEEPPMALLAFQGRLLAGVGK
DLRIYDLGMRQLLRKAQSEVAPNMIVGLQTQGSRIIVSDVQESITMVVYKFQENRLIPFV
DDTIARWTSCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADEEGSGAHLLHERQYLAGA
PHRLTLMAHNFSQDIPMSIQKTNLVAGGRDCLLWSGLQGTLGILIPFVSREDVDFFQTLE
QHLRSEDPPLAGRDHLIYRSYYVPVKGVIDGDLCERYTLLPTDKKQMIAGELDRSVREIE
RKISDIRTRSAY
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacatcaaaccaattcttgtacagcttgaccatcaatcctcccaccgccatc
acccaagcaatactcggacagtttgctggcacgaaagaacaacagattgtgactgcgtct
ggttcgcgtctcactctccatagaccggatccatcgcagggaaagatcatcacagcactt
tcacacgatgtttttggtataataagagctattgcagctttcagattggctggtagcaat
aaggattatattatcattacatccgactctggccgtataacgatcgtcgagttcgtcccc
gcacaaaacaaattcaatcgcctacatctcgagacttttggcaagtcgggcgttcgaaga
gtggttccagggcaatacctggctgtggacccaaaaggcagagcttgtttgactgcatcg
gtggagaagaataagcttgtatatgtcttgaatcgtaattcacaagcggaacttactatc
tcatcccccttggaagctcataaagcacaaactttggtgttcgcattggtagcattggat
gtgggatacgcaaaccctgtgtttgcggctctcgagattgattatggagagtcggatcag
gatccaacaggtcaagcctatgacgagattgagaaacagcttgtctactatgaacttgac
ctgggcttgaatcatgtggtgcgaaaatggtcggaacctgtcgatcgaacagcgaacata
cttttccaggtgcctggaggaactgatggacctagtggcgttttagtttgtggagaggac
aatatcacgtacaggcactctaatcaggaagcgttccgtgttgctatccctcgccgccgt
ggtgcaacagaagatccgcaaaggaaacgaaacattgtagcaggagtcatgcataaactt
aagggtgctgcaggagctttcttcttcttactacagacagatgatggtgatcttttcaag
ataaccattgagatggttgaagacgataatggtcaaccaactggcgaagtcagacgtctc
aagattaaatactttgacaccgtacctgttgcgacgagtctctgtatccttaaaagtgga
tttctttttgttgcaagcgagtttggcaaccatcagttctaccaatttgagaagcttggt
gatgatgatgaagaaacagaatttgtcagcgatgattttccaactggagctcatgaatca
tatacccccatctatttccatccacgaccagctgaaaatttaagcttagtcgaaagtatc
gactcgatgaatcctttgatggactgcaaagtcgccaatctcaccgacgaggatgcacca
caaatctattcaatttgcggtaccggcgctcgaagtactttcagaaccctgaaacatggc
ttagaagtaagtgaaattgtcgaatctgagctgcctggtgtgccatccgcagtctggacg
acaaagcttactagaggtgatacctatgatgcttacatcattctctctttctcaaacggt
actttggttcttagcatcggcgaaactgtggaggaagtaactgatactggatttttgtca
tcggcgccaaccctagctgtacagcaacttggcgaggattctttaatccaggtgcatcct
aaaggtattcgacacattcgcgcggatcatcgtgtgaatgagtgggctgctcctcagcat
cgttctatcgttgcagctactacaaatgaacggcaagttgctgtagctctaagttctggg
gagattgtctattttgagatggattcagatggatctctcgccgaatatgacgaaaagaaa
gagatgagcggtacagttacctgcttgagtcttggtgaagttccagaagggcgtcaaaga
agtcaattcttagctgttggttgcgacgactcgacagtacgtattctgagtttggatccc
gattcgacacttgagaacaagtcggttcaagctttaacttctcctccaaatgccctttcc
attatggctatgtcggactcatcatctggcggctcaactctatacctccatatcgggctc
tattctggtgtctatttacgaaccgttttagatgaagtaaccggagagctctctgacaca
cgaacacgtttccttgggccaaagcctgtcaagcttttcagagtagccgtccaaggtcag
actgcagtgcttgcgctcagctctagaccatggctcggatattcagatcccgtcaccaaa
gggtttatgctcaccccactggactatccagctttggaatggggctggaatttcagtagt
gagcagtgtactgaaggaatggtgggaattcaaggacaaaatctaagaatattttccatc
gaaaaactcaccgacaaccttttacaggaatccattcctctaacttatactcctcgtcgt
ttcgtccgacatcccgaacacgcttgtttctacgtgattgaagcagacaataatatactt
tctcctgccacaaagcagaagttactcgaggacccttctgttacaaacggcgatgccaca
gtacttcctcctgaggagtttggttacccaagaggaacaaaccactgggcgtcttgcatc
tctgtcgtcgatcctgtgaccgaaaagaaagttctttctacaattcacctcgaggataat
gaatgtgcagtcagcatcgctgttgttgctttcgctagtcaagaagatgaaaccttctta
tgtgtcggaactggtaaggatatggtggttagccccaggtcattctctgcaggttttatt
cacgtgtaccgcttccatgaagacggcaaagagctcgaattcatacacaaaacgaaagtt
gaggaaccgcccatggcattgcttgctttccaaggtagacttttagctggagtcggaaaa
gatctacgtatttacgaccttggaatgcgacaactcttacggaaagcacaatctgaagtt
gcgcctaatatgattgttggattgcaaacccagggcagtcgtatcattgtcagtgatgtc
caagagagtatcactatggttgtgtacaaatttcaagagaacagactcattccattcgtg
gatgatactatcgcaaggtggacatcctgtactaccatggtagattacgagactgtcgca
ggaggggacaaattcggtaacctttggcttcttcgttgccctgctaaagcgagtgaagaa
gcggatgaagaaggctctggtgcccatcttttacacgaacgtcaatatctggctggagct
cctcatcggttaacattgatggctcataacttttcccaggatattcctatgagcattcaa
aagacaaaccttgttgccggaggtagagattgtttattgtggagtggactccaaggcaca
ctcggtatcttgataccattcgtcagtcgagaagatgtagatttcttccagacattagaa
caacaccttagatcagaagacccgcctctggctggaagagatcacttaatataccgaagt
tattatgtgccagtaaagggcgtcattgatggagatttatgcgaaagatataccctcttg
ccaacggacaagaaacaaatgatcgcaggagagttggaccgctcggttagggagattgag
agaaaaatttcggatattcggacacgatcggcatattaa
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integrated database retrieval system
