Botrytis cinerea (Gray mold): BCIN_10g03960
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Entry
BCIN_10g03960 CDS
T01072
Name
(RefSeq) Bcrdh54
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
bfu
Botrytis cinerea (Gray mold)
Pathway
bfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BCIN_10g03960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfu03400
]
BCIN_10g03960
DNA repair and recombination proteins [BR:
bfu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
BCIN_10g03960
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
5438090
NCBI-ProteinID:
XP_024551389
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All DBs
Position
10:join(1524113..1524423,1524476..1527053)
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AA seq
962 aa
AA seq
DB search
MFKPFRPPLLKSVPKPSKPVDEFSDVQVISDSEEEILTKPAAKKRRLLIHNVEEAPKIKA
PITSSAANAPRKPLMVVKNPVEATQAPTPSENPSSIDGYYLVLWRKFTMKKHKTWDGDGI
LAVTGGYARLQNIDGRDMGRCMYNEPLLPGSTLSIGGKDVEIDAAITKADFLSGRHFLNN
SSKSSIADSHSSPAARPPPHPTLSNISKNNSTSTLGKRKDSGLGSAIPAKTFYASTPKSD
AVKSQFKNPLLATTVMPQNKSGTPTPRHDPSVPGAIVMQRPNPKYVAKGKQVVDVVVDPF
LGRHLRDHQKEGVKFLYECVMGYRSFNGQGAILADEMGLGKTLQTIALLWTLLKQNPEHP
HEGGVIKKALIVCPVTLISNWKAEFNKWLGNERIGVFVADGSKNIRLTDFTHGKSYSVMI
IGYEKLRTVQEELKKGSGIDIVVADEGHRLKTAANKSAQAIKNLNTERRVILSGTPIQND
LSEFFTMVDFVNPGLLNGYNTFKKCFEAPILKSRQPGATESDMEKGTAREEELAELTKLF
ILRRNASILAKYLKPKTEYVLFCKPTQAQAEVYQHVLASPVFGRVLGSSEASLQLITMLK
KVCNAPSLLVKKSDTDTPSNSNVAQLLESIPPEILKKNPVVASSKFRVLNRMLMRLSKST
TEKIVIVSNYTSTLDLLVSHLSSLNLPFLRLDGSTPQAKRQDLVNTFNKTPASKYFAFLL
SAKSGGAGINLIGASRLVLFDVDWNPATDLQAMARIHRDGQKRPVKIYRFLMSGGMDEKI
YQRQVTKMGLADSVMDGKKNEASFSADELRDLFRLDVNAQCQTHELLGCDCGGVGREEPV
VSASEMPEPNKEISASEEDEEDDDDEFPINPACSLVPATKANVEAQQKIALEATKGKRSK
KGKKMQALMEYRHIDTSMFHVKSADSIGTEVDDVKQSLDDEVLLSVLEDERCKVCYVFAK
KG
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaccattccggcctccactcttgaagagtgtgccgaaaccttctaagccggtc
gatgagttctcagatgtccaggttatatcagattccgaggaagaaattttgaccaaacca
gctgcaaagaagagacggcttctgattcacaatgttgaggaggctccaaagattaaggct
ccgatcacatcttcggctgccaatgcgcctcgaaaacctttgatggttgtaaagaatcct
gttgaagcaactcaagcccctactccatctgaaaatccaagtagtattgacggatactat
ttggtactatggcgcaaattcacgatgaagaaacataagacctgggatggggacggaata
ctcgcagtcaccggaggatacgcccgacttcaaaatattgatggtagagatatgggccgc
tgcatgtataatgagcctttattgcccggcagcacattgagcattggtgggaaagatgtt
gagattgatgcagccattacaaaagcagattttctttctggccgacactttttaaataat
agtagtaaatcttctatagcagacagtcatagcagtccagccgcacgacctccgcctcat
ccaaccctatcaaatatatcgaaaaacaattctacgagcacacttgggaagaggaaagat
agtggcttaggctcggcaattcctgccaaaaccttctatgcctctactccgaaaagtgat
gcagtcaaatcccaattcaagaatcctcttctagcaacgacggtcatgccacaaaataaa
agcggtacgcctactccccgtcatgatccctctgtaccaggggcaatcgtaatgcaacgg
ccaaaccctaagtatgttgcgaaaggcaagcaagttgtggatgttgtcgtcgatcccttc
ttgggtcgccatttacgtgatcatcaaaaggagggagttaagtttttgtacgagtgcgtt
atgggctaccgttcttttaatgggcagggtgcaatcttagctgatgagatgggtctggga
aagacactgcagacaatcgcgctgttatggacattattgaagcaaaatccggagcatcca
cacgaggggggcgtcataaagaaggccttgattgtctgtcctgtaactcttatctccaac
tggaaagcagaattcaacaagtggcttggtaatgaaagaatcggcgtttttgttgccgat
ggatctaaaaacattcgacttactgatttcactcacggcaagagttacagcgtcatgatc
atcgggtacgagaagttacgcacagtgcaagaagagctaaagaaagggagtggaatagat
atagtcgtagctgatgaagggcaccgtttgaagactgctgcgaacaaatcggcgcaggca
atcaagaatttgaatacggagagacgagttattctatctggaacacccatacaaaatgat
ctgtcggagttcttcacaatggtagactttgtgaaccccggtcttctcaatggctacaat
actttcaaaaaatgtttcgaggccccaatattgaaaagcagacagccaggtgctacagag
agcgacatggagaaaggaacggctcgagaagaggagttggctgagttgacaaagttattc
atattacgtcgcaacgccagcatacttgcaaaatacttgaagccaaagacagaatatgta
ttgttctgcaagcccacgcaagctcaggctgaagtgtatcagcatgttcttgcctctccg
gtcttcggtagagtccttggcagctcagaggcctctctacagcttatcaccatgctcaag
aaagtctgcaacgctccgagcctccttgtcaaaaagagtgatacagatactcctagcaat
tcaaacgttgctcagcttctagaaagcatacctcccgagattctcaagaaaaatccagtt
gtggcaagcagtaaattcagagttttaaatcgtatgctcatgcggctttcgaagtcaact
actgaaaagatagttattgtctccaactacacttctactctcgacctgttggtgtcacac
ctttcgtcattgaacttaccctttctgcgcctcgatggtagcactcctcaggcaaaacgg
caggatctagtaaacacgttcaacaagacacctgcatcgaaatattttgcctttctgctt
tcggctaaatctggcggtgccggtataaacctgattggggcctcacgcctcgtactgttt
gacgttgactggaatcctgctaccgaccttcaagccatggcacgtatccaccgcgacggg
caaaagcgtccagtcaagatatacaggtttctgatgtcgggaggcatggatgaaaagata
taccagcgacaagttaccaagatgggactcgccgacagtgtcatggatggcaagaagaac
gaagcgagtttctcagccgatgagctgcgagatctctttaggttggatgtaaatgcgcaa
tgccaaactcacgaactcctaggttgcgattgtggaggggttggtcgcgaggagccagtt
gtatcagcatctgagatgccggagcccaataaagagatcagtgccagcgaagaggatgaa
gaggacgacgatgatgagttccctatcaatccagcttgttctctggtgccagcaactaaa
gcaaatgtggaggcccagcaaaagattgctctagaagccactaaaggaaaacgatccaag
aaaggaaagaagatgcaagcgttaatggagtacagacacattgatacttcaatgttccat
gttaaatcggcagattcgattggtacagaggtagacgacgtaaaacagtctctagatgac
gaagtcttactttcagttctagaggatgaaagatgtaaagtttgctatgtttttgctaag
aaaggatag
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