| Entry |
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| Name |
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| KO |
| K12604 | CCR4-NOT transcription complex subunit 1 |
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| Organism |
bfu Botrytis cinerea (gray mold)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bfu00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_11g03940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bfu03019]
BCIN_11g03940
Messenger RNA biogenesis [BR:bfu03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BCIN_11g03940
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BCIN_11g03940
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
11:complement(join(1467934..1467981,1468036..1473986,1474052..1474376,1474449..1474697))
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| AA seq |
2190 aa
MVNSRGGTFTPSPAQTIVTGVSHSPHGSHHSTFSAGASPSTNSPIGGSGVNKIVVAQVYL
LLGTIKEDKDRTKWEQQAEQLRKLVDEHGMEVFSKYFSRLVVGNAPQIFPGINRPVLNSG
NYQILVNEVHKVAHDVDQAGKIAESIETGNEDIFRDFDLSTFMDHFKLDALEKTILALAF
KTGSRSDLKTKADAILSANYQGFVEALSQVNQGQEDLTPSFLATIVDRFIQGRPPNLDRQ
AQVLLFRAISYRFRDHPEQDIPAPTEVLAALFLMSIITEGNALVLYIQKTGAAFTSDEET
CRNYIRHAGDITLDEAQVSDALLYTAISRTPTFSPQVFVSSLRKEVPAGFSWLQVVQHFD
TPELRISPQQFLAVYEAIRPIALEDPAIIPQLLGGVWQNTETQLSFISAYASLNPHELDA
STIPKLRPSFTLDDYADAKPEVRERAEWAVRHPLVSVITLTSVFIVALRETQYSETVEAK
RLFQEVVVPNLDIFLVSAFGVPRPWPELAVETINNLFERFLFRVDGHYDFVLASLWRKDK
TWVAQRLMDAHVKAPLELPLILEHAIKHEWLHELASMLNGFGLDLAALAHSRSYLDIKDW
KATNSPREEELGTALLTFLSIKAQHEIVCQKTSQPHSIMLPVKTVFAMLNVLEEILPKEP
SAELIAVQRTCITAYPRLINYGQDDELDRIIDNNGLVTNMLSENAQHMMEQHYKQMYSQE
LKVRQIVDALAGYKSARDPYQQDVFACMIHGLFDEYTLYSTYPLEALATTAVLFGGIIQN
KLIADLPLEIGLGMILEAVRDHLPEESMYKFGLQALLQFIPRLSEWPGFCHQLLQVPGLE
GTEPWKRAQNVIHDQQEDMLRNGHNDLMNGGGITNGNIDVLLSAEPSAPPFNSINVDPLP
PNADFKDPDPEAQGKVQFLLNNITEVNVQSKFHELKSALDETNQKWFAGHLVEERAKVQP
NYHVLYLKLVKLFEDKILWNQLLRETFISVSKLLNAESTLQSSIDRTHLKNLGGWLGSMT
LANDKPVKHRNIAFKQLLLEACDTQRLIVVIPFVCKVLFEGRNSVVFKPPNPWLMDIIHL
LIELYHNAELKLNLKFEIEVLCKGLSLDHKSIKPSTEFQSRIPPIEEATEPMAVPDGLDR
FENLSVNGLGGGIASGRFSPQEILSTMPDLGPLLTYPPSNDMVNTRQLHDILKTAITRAV
HEIISPVVERSVTIAAISTAQMIHKDFATEPNEARVRSAAINMVKKTAGSLALVTSKEPL
RASMTNYIRTLSVEHQLPEGTIIMCVNSNLDLACSQVEKKAEERAVPEIEEILEPELEAR
RLHHIRRPDDPYIDPQLSRWAWTIPSPYKLQPSMSGLNQEQMAIYDEFARQPRLLPLADR
SSVAGSLAGTTHVATASDATTSITNDLLRDQFPTVPNLPAPAETPTIPLVNNQQAPYSQP
SAALSNGRMPNLAMNPQGLPEKVQRLLADLQQTTADIPEQHYMDLPRPHPVIEILDALYG
LIIRSQQGQEPYDIWIAEQICGIVFSGSENTLVIECLVHVLENIIRIGGRCAVRVSMIIG
QQVGEALLHVPLIIALVKAEMIDWARVDFATSTALAERKEGTLEFFLSLLEQVFLCDRPL
ALYTDVAKSLEVAFEWISKEPDLEVGQQLKEKLAASALPKSVGRGQNERLAFRQDQMEYV
FEEWIHLFSNPIAPERAALVFISHMYNRQLINDKEDLCLFLRLSIDTSVERFEQQIQMHG
FLNDAYIPIDALAKLISLLVRGYEREGEVKGDKAAFLESVLSVITLVLNHHHVMRGEGFN
QKVFTRLLSSMLCHLNTFSADLSETENRQIILTFAEKLIKLQPAYFPGFVYGWMTLISHR
FFLVPLMGLPDDMGWQPFAKLAECLLSYTGELLKPLQLTLAARDIYQGVLKFFLVLQHDY
PDFVVAYSSKLCANVPSHCVQLLNLILNAHPTKIQLPDPLQPGLKIERIEEIRMSPEIVN
SIDIEGTLQSTGLYEILEQALQNGPSEDAVAHITHTIQRKQTEVSGPGFVPVNVDLQLIE
SIVLHICMYAVTRASQKGELNSFARGSTDAALLSMLVHELNPEARHYLLTSIVNQLRFPN
AHTNYFVQALLELFGNDVNDQEESDISQQILRVLLERAFVSLPIPWGVLNMVIELAKNEN
KYKFFDLPYIKSTPEVAERIAVIVQRSLSR |
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| NT seq |
6573 nt +upstreamnt +downstreamnt
atggtgaattcaagaggggggactttcacaccttcaccggcgcaaacaattgtgacagga
gttagtcattcacctcacggctcgcatcatagtacattcagtgctggcgcaagtccatct
acaaacagtccaatcggtggcagcggagtcaataaaatcgtcgtcgctcaggtttacctg
ttactcggtacaattaaagaagataaagatcgcacaaagtgggaacaacaagctgaacag
ctcagaaagctagttgatgagcacggcatggaagtattctcaaaatacttcagccgactt
gtggttggcaacgcaccgcagatatttcctggcattaatcgaccggttcttaattcaggc
aactatcagattttggtaaatgaagtacacaaggttgcccatgatgttgaccaggctggg
aagattgcggagtccatagagacggggaatgaagacatcttccgtgatttcgacctttca
acctttatggatcattttaagctagacgcgctcgagaagacaattctagcacttgcattt
aaaactggatcaagatcagatcttaaaactaaagcggacgctatcctgtcagcaaattat
caaggcttcgtagaagctctatctcaggtgaatcaaggtcaagaagatctcacaccatcc
ttcctcgccacgatagtcgatcgatttatccaaggtcgtccaccgaatctcgatcgtcaa
gcgcaagttctactgtttagagcaatcagctaccgttttcgcgaccatccagagcaagac
attcccgcacccacagaagttctcgcggcgctgttcctaatgtcgataattacagaaggg
aatgcactggtattatacatacaaaaaaccggggcagcgttcacatcagacgaggagaca
tgcagaaattatatccgacatgctggggatatcactctcgatgaggcacaagtttctgat
gccttactatatactgccatcagtcgaacccctacgttctctccgcaagtatttgttagt
agtctgcgcaaagaagttcccgcagggttcagttggctgcaagttgtacagcatttcgat
acgccagagctgagaatatctccacaacaatttctagcagtttacgaagctattcgacca
attgcgcttgaagaccctgcaattattccacaactgctcggtggtgtctggcaaaatact
gaaacccagctttctttcatcagcgcatatgcatccttgaacccacacgagcttgatgcc
tccaccattccaaagcttaggccatcattcacactggacgactatgccgatgctaagcca
gaggttcgagagcgtgctgaatgggcagtgaggcacccgcttgtgtccgttatcacacta
acatcggttttcatcgtcgccctcagagagacccaatactcagaaacagttgaagcgaag
cgattgttccaagaagtggttgtaccaaacctagacatattcctagtctcagcatttggt
gtaccgcgaccgtggcctgaattagcagtggagacaatcaacaatcttttcgaacgcttt
ctattcagggtcgatggtcactatgatttcgtcttggcaagcttatggcgaaaagacaag
acttgggtagcacaacgcttgatggacgcgcatgttaaggcacctctcgagcttcctctt
atattagagcatgcaataaagcatgaatggcttcacgaactggcctccatgcttaatggc
ttcggcctcgatctcgccgccctagcacactcacgtagctatctggacatcaaagactgg
aaggctacgaattcgccacgagaggaagaacttggcacagctctattgactttcctgagt
atcaaagctcaacacgagattgtatgtcaaaaaacttcgcaacctcacagtataatgcta
cctgtcaaaactgtattcgccatgctgaatgtcttggaggaaattttaccaaaagaacct
tctgcagagttgattgcagtacagcggacttgtatcactgcataccctcgtttgataaat
tatggccaggatgacgagctagaccgaatcattgataacaacggcttggtgaccaacatg
ctaagcgaaaacgcacagcacatgatggagcagcattataagcagatgtatagtcaagag
ctcaaggttcggcagattgttgatgccttggctggttacaaatctgcccgcgacccctac
cagcaagatgtgtttgcctgtatgatccacggcctttttgatgaatataccctctattct
acctatccgcttgaggctcttgcaacaaccgctgttttgttcggtggtatcattcagaat
aagctcattgctgatctaccccttgagattggtctgggtatgattcttgaagcagtccga
gatcaccttccagaggaatctatgtacaaattcgggttacaggctttattgcaattcata
cctcgtttatcggaatggcctggattctgtcatcagttgctacaagtgcctggtctcgaa
ggtacggaaccttggaaaagagcacaaaatgtcatacacgaccaacaagaagacatgttg
cgcaacgggcataatgacctaatgaatggaggtggaattacaaatggcaatatcgatgta
ctgctctctgctgaaccttccgcaccaccattcaactctatcaacgtggatccgctccct
ccaaatgcagactttaaagatcccgaccccgaagcacaaggcaaagtgcaatttttgttg
aacaatatcaccgaggtcaacgtgcaatcgaaattccacgaattaaaaagcgcccttgac
gagacaaatcaaaagtggttcgctggtcatttagtagaggaacgagctaaagttcagcct
aactaccacgtcctatatcttaaactagtcaaactttttgaagacaagatcttatggaac
caattattaagagagacttttatcagtgtttccaagctgcttaatgccgaaagcactttg
caatcttcaatcgaccgcacgcatttgaagaatctcggtggttggttaggctctatgaca
cttgctaatgataagcctgtcaagcacaggaacattgctttcaagcaactgttactcgag
gcttgcgacacgcaacgactcattgttgtcattccattcgtttgcaaagttctcttcgaa
ggcagaaactcggttgtcttcaaaccaccaaacccctggcttatggatatcattcacctt
ttgatcgaattgtaccacaacgcggagcttaagctgaacctcaagtttgaaatcgaagtg
ctctgtaaaggtttgagtctggatcataagagtatcaagccctctacagaattccagagc
cgcatcccacccattgaagaggccaccgagccaatggcagtacctgatggtctggataga
ttcgagaacctttctgtgaatggtttaggaggcggaatcgccagtggccgattttctccg
caagaaatcctttctaccatgcctgatctcggaccacttcttacttacccccctagcaat
gacatggtgaacacacgccaattgcatgatattctcaaaaccgcaattactcgagcagtc
catgagattatttcgccggttgtggaacgttctgtcactattgctgctatttcgaccgct
caaatgatacacaaggactttgcaaccgagcccaacgaagctcgtgtgcgctctgcagct
atcaatatggtcaagaagactgctggtagtctcgctttggtcacttctaaagagccgttg
cgtgcaagcatgacaaattatattagaacattatcagtcgagcatcaattacctgaaggt
accataatcatgtgtgtaaattcaaatctcgatctagcttgtagccaggtcgaaaagaag
gctgaggaacgcgctgttcctgaaatcgaagagattctggagccagaactagaagcccga
cgcctccatcacatcagacgaccagatgatccatacattgatcctcaactcagtcgctgg
gcctggaccattccaagcccgtataagttgcagccgtcaatgtctggccttaaccaggag
caaatggcgatttacgatgagtttgctcgtcagccgagactactacctctggccgataga
agctcagtagcaggctccttggccggtacaacccatgttgctacagcttcagatgcaaca
acatctatcaccaatgatcttctacgagatcaatttcccacggttccaaaccttccagca
cccgctgaaactcctacaattccacttgtcaacaatcagcaagctccttacagccagcct
tcggctgccctgtccaacggaagaatgccaaacttggccatgaacccccaagggttgccg
gaaaaggtgcaaaggttgttggctgacttacaacaaacgactgccgatattcctgagcag
cactacatggatcttcctcgaccacatcctgttattgagatcttagatgccttgtacggt
ttaatcatcagaagccagcaaggacaagaaccttatgacatctggattgcagagcaaatc
tgtggaatcgtgtttagtggtagtgaaaacactttggtgattgagtgcttagtgcatgta
cttgaaaacattatcaggattggtggtcgttgtgctgttcgtgtttcaatgatcattgga
cagcaagtcggagaagcacttctccatgttcctctgatcattgcattggtcaaggctgaa
atgatcgattgggcacgcgtcgacttcgctacctctacagccttggcagagcgcaaagaa
gggaccctagaattcttcctttctctcttggagcaggttttcttatgcgatcgaccacta
gcactgtatactgatgtcgcgaaaagtttggaagtcgctttcgaatggatatcaaaagag
cctgacttggaagttggccagcagctcaaggagaagcttgcagcttctgcccttccaaaa
agcgtcggccgcggccaaaatgaacgacttgcctttcgtcaagatcaaatggaatatgtc
ttcgaggagtggattcacttgttcagcaaccccattgctccggagagagcggcgctggta
ttcatatctcacatgtacaacagacagcttatcaacgataaggaagacctttgccttttc
ttgcgcctttcgattgatacatcagtcgaacgttttgaacaacaaattcaaatgcatggc
ttccttaatgatgcctacatccctattgacgcgttggcaaagcttatatctcttctagta
aggggctatgagcgtgaaggtgaagtgaagggcgacaaagctgcgttcttggaatcagtt
ctgtcagtcataacgttggttttgaatcatcatcatgtcatgcggggcgaaggtttcaat
cagaaggtctttacacgacttctttcttccatgctctgtcacttgaataccttctcagct
gatttatccgaaacggagaaccgccaaatcatcttgacattcgctgaaaagctcatcaaa
cttcaaccagcttacttcccaggctttgtatacggttggatgaccttaatctctcatcgc
ttcttccttgtaccattgatgggacttccggatgatatggggtggcaaccatttgcaaaa
cttgcggagtgtttactatcctatacaggcgagctactgaagccattacagttgacattg
gcggcaagggatatttatcaaggggttctcaagttctttcttgtgttacaacatgattac
cctgacttcgtagttgcatactcgtcaaagttatgtgccaatgttccaagtcattgtgtt
caattgttgaatctcattctcaacgctcacccaacgaagatccagctaccagatccatta
cagccaggattgaaaattgaacgcattgaagagatccgcatgtcaccagaaattgtcaac
agcattgatattgaaggaaccttacaatcaactggtttgtatgagattctcgaacaagca
ttacaaaatggcccctcagaagatgcggtggcccacattacacatactatacaacggaag
caaaccgaagtgagcggtccaggatttgtacctgtcaatgtcgacttgcagcttattgag
tctatcgttctacacatctgtatgtacgctgttacaagagcaagccaaaagggagagctc
aatagttttgctcgcggttctactgatgctgctttgctctcgatgcttgttcacgaactc
aatccagaagctcgacattatcttttgaccagcatagtcaaccaacttcgttttcctaac
gcccacacaaactacttcgtgcaagcgctcctggaactatttggaaatgacgtcaatgat
caagaggagtccgatatcagccaacaaattctccgggttttgttagaaagagcgttcgtt
tccctaccgatcccttggggcgtacttaacatggtcatcgaactcgccaagaacgaaaat
aaatacaaattctttgacttgccatatatcaagtcgacaccagaggtcgctgaacgaatt
gctgttatcgtgcagcgttctctctcaagataa |
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