Botrytis cinerea (gray mold): BCIN_12g01810
Help
Entry
BCIN_12g01810 CDS
T01072
Name
(RefSeq) Bcdbp10
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
bfu
Botrytis cinerea (gray mold)
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfu03009
]
BCIN_12g01810
Enzymes [BR:
bfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCIN_12g01810
Ribosome biogenesis [BR:
bfu03009
]
Eukaryotic type
Pre-60S particles
Helicases
BCIN_12g01810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
5430772
NCBI-ProteinID:
XP_024552077
UniProt:
A0A384JYK7
LinkDB
All DBs
Position
12:complement(join(630279..632761,632817..633096))
Genome browser
AA seq
920 aa
AA seq
DB search
MPRRAASPALSENDFDITKSLFNEDIDGDDDNFGNTTTKNVEPLDANGILDLGLESDGDG
DGAFISAQQSAANRKNSNLKGQSVKKGGGFQAMGLNSHLLKAISRKGFNVPTPIQRKTIP
LVLDNQDVVGMARTGSGKTAAFVIPMIEKLRAHSARVGARALIMSPSRELALQTLKVVKE
FGRGTDLKCVLLVGGDSLEEQFGFMAGNPDIVIATPGRFLHLKVEMSLDLSSMKYVVFDE
ADRLFEMGFAAQLGEILHALPISRQTLLFSATLPKSLVEFARAGLQEPSLVRLDAESKVS
PDLQSAFFSVKGAEKEGALLHILQDLVKMPTGLPENALNATDRFDKKRKRGPDGPSRKLK
PTEHSTIIFAATKHHVDYLASLLRMSGFAVSHAYGSLDQTARNIQVEDFRTGKSNILVVT
DVAARGIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWSYSLVRDTDAPYLLDLQL
FLGRRLLLGRECGDSPNYAEDVIVGALQRNEIESKSEWITKLLYDDDDLTALRNVSAKGE
KLYVKTRNSASSESAKRAKEVVASKGWMELHPLFKDVTNGAEQARLDMLAKISGFRPNET
VFEIGQKGKAAHSEAAEIMRHRREKIIPRRQKEEDEKAAAAAEELDNDTPMEVDGDDNDD
DDLEVTVTGGDDDMAEASENELEVTFSKASQKGKGRTLSWKDSENFMSYTPKTINTAEER
GYGVHSGSYNTASQNSNFVEAARGVTMDLTNDDGAKSFAEPARAKGMRWDKKNSKYVARA
NDEDGSKGTKYIRGESGQKIAASFQSGRFDRWRKAHKVDRMPRTGEAEREGPASAGGVGR
GFGTRYKHKQERAPKEADKYRDDYHVRKKRVAEAKEKRVGSFKDGSGKSEIKSTEDIRKD
RKLQERRKAKNARPSKKGKY
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtcgtgcagcttcccccgcgctttcggagaatgattttgatatcacaaaatct
ctcttcaacgaggatatcgacggagacgatgacaatttcggaaacacaacgaccaagaat
gtagaacctctggatgctaatggtatactggatttgggacttgagagtgacggagatggc
gatggggcttttatatcagcacagcaatcagctgcgaaccgcaagaattcaaatctgaaa
gggcagagtgtcaagaagggtggcggatttcaggcaatgggattgaactctcatttgtta
aaggcaattagtagaaaaggattcaatgtacctacacctattcaacgaaaaacgatacct
ttagtcctcgataatcaagatgttgttggtatggctagaactggttccggaaaaactgcc
gccttcgtcattcccatgattgaaaagttgagagctcacagtgcgcgtgttggtgcaaga
gccttgattatgtctccatctcgagaattggctttacaaacattgaaagttgttaaggaa
tttggacgaggaactgaccttaaatgtgtattacttgttggaggcgacagtctcgaagaa
caattcggatttatggccggaaatcctgatattgttattgctacgcctggtcgatttttg
catttgaaggttgaaatgtctttggacttatcgtcgatgaaatatgttgtctttgatgag
gccgatcgtctgttcgaaatgggtttcgctgctcaacttggagaaattctccacgccttg
ccaatttcaagacaaactttgttgttctctgcgaccttaccaaagtcgctggtagaattt
gccagagctggtcttcaagagccaagtttggttcgtctcgatgcagagagcaaagtttcc
ccagatcttcagagtgcttttttcagtgttaaaggtgctgaaaaggaaggtgctttattg
catatcctccaagatttggtcaaaatgcccacaggtctacccgagaatgcactaaatgca
acagacaggtttgacaagaagcgcaagagaggtcccgatggcccaagtagaaaactaaag
cccacagagcattcaaccatcatattcgcagctacgaagcatcatgtcgactatctcgca
tctctacttcgcatgtctgggtttgccgtttctcatgcctatggttcgctcgatcaaacc
gctagaaatattcaggttgaagatttccgtaccggaaaatcaaatatattagtagttact
gatgtcgctgctagaggtattgatattcctgtcttagcaaatgtcatcaattacgacttt
ccaccacaaccaaaggttttcgttcatcgagttggtcgtactgcaagagctggtcaacgg
ggttggagttacagtttggttagagatactgatgcgccatatcttctcgatctacagcta
tttttaggaaggagattactcctcggacgcgagtgtggtgattctccaaattacgctgaa
gatgtaattgttggcgctctacagagaaatgagatagaaagcaagtcggaatggattacg
aaacttctctatgatgatgatgatcttacagcacttcgaaacgtatcggccaagggagaa
aaactctacgttaagacacgtaactcggcatcaagcgagagtgcaaagagagccaaagaa
gtagtggcgtcgaaagggtggatggaattacatccacttttcaaggatgtcaccaatggt
gctgaacaagctagattagatatgcttgcgaagattagtggattccgaccaaatgagact
gtctttgagatcgggcaaaagggtaaagctgctcacagtgaggctgctgaaatcatgcga
catcgaagggagaaaatcattccaagacgacagaaggaggaggacgaaaaggcagctgca
gctgcagaagaattagataacgatacacctatggaggtagatggggatgacaatgacgat
gatgatcttgaggtcacggttactggaggagatgacgacatggccgaggcatcggaaaac
gagcttgaagttaccttctcgaaagcatcccaaaaaggcaaaggacgaacactgtcttgg
aaagactccgaaaacttcatgtcatacacaccaaaaactatcaatacggcagaagaacgt
ggatatggtgttcactctggttcatataacacagcatctcaaaactcaaatttcgtcgag
gcagctagaggcgttactatggatctcactaatgatgacggtgcgaaatcctttgccgag
cccgccagggcaaagggaatgagatgggataaaaagaatagtaaatatgtcgctcgagcc
aacgatgaggatggatctaaaggaaccaaatatatccgcggagagagtggtcaaaagatt
gcagctagtttccaaagtggtcgattcgatagatggcgtaaagcacacaaggtcgaccgt
atgcctcgaacaggtgaagcagaacgagaaggtcctgcaagtgctggtggagtgggacga
ggcttcggtacaagatataagcataagcaagagagagcaccaaaggaagcagataaatac
cgtgatgattatcatgtcaggaagaagagagttgctgaggcaaaggaaaagagagttggt
tcgttcaaagacggtagtggaaagtcggaaattaagagtacggaagatattcgaaaggat
agaaagttacaggaaaggaggaaagcaaagaatgctagaccgtcgaagaaaggtaaatat
tag
DBGET
integrated database retrieval system
