Botrytis cinerea (gray mold): BCIN_12g02940
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Entry
BCIN_12g02940 CDS
T01072
Symbol
Bcfip1
Name
(RefSeq) Bcfip1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BCIN_12g02940 (Bcfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_12g02940 (Bcfip1)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
BCIN_12g02940 (Bcfip1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
5438769
NCBI-ProteinID:
XP_024552153
UniProt:
A0A384JZM2
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All DBs
Position
12:join(1007136..1007303,1007357..1007412,1007461..1007696,1007758..1008245)
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AA seq
315 aa
AA seq
DB search
MDIDEDDDFYAPEESAPLSLNQVAPTEAAQPEVKAEQQDEGLEEGEEEDEDEDSDSDIDI
ITEKKDGAPPSTKPQGAKYDKLPGSDLPSHTKSTTEADEKAPAVKTEKVKKDSETPAISG
AELPGLATSKIDVNAKPMYEPAGKPITQINIDEDLNENDKPWRRPGTDISDYFNYGFDEF
TWALYANKQESLRSEFDPNKIAQNNKKMFEDMNMMMAMGGMPGMQAAGGMPGMEGMTPEM
MQQMQQMMAAGGMDPSQMDPSMFGGSNPAGGAGGFGGGQFGGGGFDQGMMGSGGENSNRG
GGFGRGRGRRGRGNW
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgatgaagacgatgatttttatgcgcccgaagagagtgcgccgctttcttta
aaccaagtcgcgcccacagaagctgcgcagcctgaagtcaaagccgaacagcaggatgaa
ggtttagaggagggcgaggaggaagatgaggacgaggacagcgactcggacatagatatt
atcacagaaaagaaagatggtgctccgccatccacaaagcctcaaggcgcaaaatacgat
aaattgcccggcagtgatcttccaagccatacgaaatctacgaccgaagcagacgagaaa
gctcccgccgtgaaaaccgagaaagtaaagaaagattctgagacaccagcgatatccggt
gcagaattacctggactagcgacatcaaaaattgacgtaaatgcaaagcctatgtatgag
ccagccgggaaaccaatcacacaaatcaatattgatgaagatctcaatgaaaacgacaaa
ccttggagaagacccggtaccgacatatctgattacttcaattacggtttcgatgaattt
acctgggccctctacgccaacaaacaagaatcattgcgctccgaattcgaccccaataaa
atcgcacagaacaataagaaaatgttcgaggatatgaatatgatgatggccatgggtgga
atgccgggaatgcaagccgcaggcggtatgcctggcatggaaggaatgacgccagaaatg
atgcagcaaatgcaacagatgatggcagcgggtggaatggatcctagccagatggacccc
tctatgttcggaggctcgaatccagcggggggtgcggggggttttggaggaggtcaattt
ggaggtggagggtttgatcaaggcatgatgggttctggaggtgaaaatagtaacagggga
ggaggttttggaagaggtagaggtagaagaggaagaggaaattggtaa
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