Botrytis cinerea (gray mold): BCIN_13g00540
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Entry
BCIN_13g00540 CDS
T01072
Symbol
Bcsnf5
Name
(RefSeq) Bcsnf5
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03082
ATP-dependent chromatin remodeling
bfu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
BCIN_13g00540 (Bcsnf5)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
BCIN_13g00540 (Bcsnf5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfu01009
]
BCIN_13g00540 (Bcsnf5)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfu03021
]
BCIN_13g00540 (Bcsnf5)
03036 Chromosome and associated proteins [BR:
bfu03036
]
BCIN_13g00540 (Bcsnf5)
Protein phosphatases and associated proteins [BR:
bfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
BCIN_13g00540 (Bcsnf5)
Transcription machinery [BR:
bfu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
BCIN_13g00540 (Bcsnf5)
SWI/SNF complex
BCIN_13g00540 (Bcsnf5)
Chromosome and associated proteins [BR:
bfu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
BCIN_13g00540 (Bcsnf5)
PBAF complex
BCIN_13g00540 (Bcsnf5)
SWI/SNF complex
BCIN_13g00540 (Bcsnf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
5426531
NCBI-ProteinID:
XP_001546059
UniProt:
A0A384K049
LinkDB
All DBs
Position
13:complement(join(212324..212641,212773..214626))
Genome browser
AA seq
723 aa
AA seq
DB search
MTQDIQQTSQDDSSSANANATAPSESANPNSSQSSTLTHRPRTKSDFNKLLLEQYLHHTL
IHSAAIVDDQDKRKAYYLHKHHEAQDYELVKNHKDVFTASRLYGTGYNGYGNGFTDGPTR
ILYSHAKFAKRKAKPLRIKRKDMAMQADQVEELVPIRLDVDWDKVKLRDTFTWNLHDRTV
TTELFAKQLIADFGLITPVAEPILQQVQQQMHDQIVDFNPLVYFPEDPLDEMLPYTAYKN
DELRILIKLNITIGPHTLEDKFEWDINNPLNSPEEFAQSMAKDLSLSGEFTTAIAHCIRE
QSQLFIRSLYGVGHPFDGRPVEDADLVAAFLPSPLPSVLRPHQQIKEFAPYLYEVTEADL
EKHDLVFSREQRRQKRSVNRRGGPVLPDLKDRQRTVRTLVVSSVLPGAAATVEESRLYKR
VGVPSGRGRRAGFGRQDGADLSESDDSEDSNPESPAVQVSQGTARTRNMRGAATAAQQRM
ANIGRSETPESMLAHHHETRISGRKSGRDAREDTVDTPSLIVKLKMSKEKFKKLVKDLGK
SRPSHQQTPSVTRATSTFGTPAPTGSMGPPSTPGVQPAQPLATTPAPAPTPQPVNAVAVG
QIGRIDAPPPIPGQAPPAPPPPPSWLATGLTALHQQYPNDRFEGMMRYSAVSITTETPVP
APAPGTNPEGIKWMYLPRIRCHDCPGKLYTPGPDTTVGNFEVHLKNKGHREKVNLRIGAQ
VTT
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagatattcagcagacttctcaagatgattcttcctcagctaatgctaatgca
actgcgccttctgagtctgcgaatcccaattcatcccagtcttccactttaactcatcga
cctcgaacgaaatcggatttcaataagctattacttgaacaatacttacaccacacttta
attcattctgctgccattgttgatgaccaggataaacgaaaggcgtattatctccacaaa
catcacgaagcgcaagactacgagctggtcaaaaaccacaaagatgtctttacagcaagt
cgattgtatgggacaggttacaatggatacgggaatggattcaccgatggaccaacgagg
atattatattcgcatgcgaaattcgcaaagaggaaagcaaagcccttgcggatcaagcgc
aaagatatggccatgcaggcagatcaagtggaggagttggttcccataaggttggatgtg
gattgggataaggtcaagcttcgagatacttttacctggaatttacacgatcgaacggtt
accacagagttgttcgcgaagcaacttatagcggatttcggtctgattactccagtagca
gaaccgatactacaacaagttcaacaacaaatgcacgatcaaatcgtcgactttaacccc
ttggtttactttccggaagatcccttggatgaaatgttaccatatacggcatacaagaac
gacgagctgcgtatcctcatcaagctcaacatcactattggaccacacacattggaagat
aaattcgaatgggatatcaataatccattgaattcacccgaagagtttgcgcaaagtatg
gccaaagatttgtcactctccggggagttcactacagcaatcgcccattgtatacgtgaa
caaagtcaactgttcatacggagtttgtacggtgttgggcatccatttgatggccggcca
gtagaagatgccgatttagttgcagcattcttaccttcacctctaccttcagtattacga
ccacatcaacaaatcaaggaatttgcgccatatctgtatgaagtgaccgaagcagattta
gagaaacatgatttagtattttcacgagaacaaagaaggcagaagagatctgtaaatagg
agaggagggccagtcttaccagatctaaaagataggcaaaggacagtgagaactttagtt
gtttcttccgtgttacctggggcagcagcaacggttgaagagagtcgattatacaaacga
gtaggagtaccatcaggaagaggaaggcgtgctggttttggtcgacaagatggtgcggat
ctatcagaatcggacgatagtgaagattctaatcctgaatcaccggctgtccaagtcagt
caaggtactgcaaggaccagaaatatgcgtggagcagctacagctgctcaacaaagaatg
gccaatattggaagatcagaaactccagaatctatgctagcacaccatcatgaaactcgg
atatcggggagaaaatctggacgtgacgctcgcgaggatactgtggataccccttcacta
atagtgaaattgaaaatgtccaaagagaaattcaagaaattagtcaaagatctaggcaaa
agtcgtccaagccatcaacaaactccttctgtcactcgcgcaacatcaacatttggtact
cctgctccaactggatctatgggtccaccatcaacacccggtgttcaaccagctcaacca
ttggcaacaacaccagcaccagcacctactccacaaccagtaaatgctgtggcagtgggt
cagattggtagaatcgatgcgccacctcctatacctggtcaagctcctccagctccccct
ccaccgccctcctggctagcaactggcctaacagccctccatcaacaataccccaacgat
cgtttcgaaggtatgatgcgatactcggctgtttccatcacaacagaaactccagtccca
gctccagctccaggtacaaaccctgagggtattaagtggatgtatcttcccagaatcaga
tgtcatgattgtccaggaaagttgtatacgccgggtccagatacgacagtagggaatttt
gaagtgcatttgaagaataaaggacacagggaaaaggtcaatttgaggattggggcacaa
gtgacgacttga
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