Botrytis cinerea (gray mold): BCIN_13g00980
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Entry
BCIN_13g00980 CDS
T01072
Symbol
Bchbs1
Name
(RefSeq) Bchbs1
KO
K14416
elongation factor 1 alpha-like protein
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BCIN_13g00980 (Bchbs1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_13g00980 (Bchbs1)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
BCIN_13g00980 (Bchbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
GTP-eEF1A_C
MMR_HSR1
GTP_EFTU_D2
GTP_EFTU_D3
Ras
Roc
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
5437726
NCBI-ProteinID:
XP_024552452
UniProt:
A0A384K096
LinkDB
All DBs
Position
13:complement(join(361279..362489,362537..362692,362742..362783,363596..363802,363870..363966))
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AA seq
570 aa
AA seq
DB search
MSRHKFVKAMALDYDDADDIYEEDYGEEEAGQELSEEDQEQMREGAIKVREILPADSTNF
TDKQIQEALWHYYYDIEKSVTYLLGTLTPKVTKKAAGKKSSGPSPDDVVIAAQSKAAGKG
KKGPSKGPAKVEGSTEVETHKIKSKDLDVLAEFEKAKSKNAANFVVIGHVDAGKSTLMGR
LLYDLKVVDQRTVDRYRKEAEAMGKSSFALAWVLDQGTEERSRGVTIDIAMNKFETEKTT
FTILDAPGHRDFIPNMIAGASQADFAVLVIDASVGSFESGLKGQTKEHALLARSMGVQRI
IIAVNKLDTVGWSQERFDEISQQVSAFLTAAGFQEQNIKFIPCSGLHGDNIARKSTEQAA
AWYTGPTLVEELDHSEPVTRALTKPLRLTIGDIFRGGVQNPLSISGRIDAGSLQVGDQLL
AQPSNEKCFIKGLEIDNEPVDWAVAGQIITIHLSDIDQAHLKIGDVLCTPSQPISNIKTF
TAKVLAFEFLTPMQVDVHRGRMHTAGKIKELVAVLDKGTGKTMGKKKPRIVKPAQVARVI
VELEVPVPLEAPERVILRCDGVTVAAGLLE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccacaagtttgtcaaagcaatggcgctcgattatgatgacgcagatgacatt
tacgaagaagattacggtgaggaggaagctggtcaagaactgagcgaagaagatcaagag
caaatgcgagaaggagcaatcaaagtacgcgaaatcttaccggccgactcgaccaatttc
acggataagcaaatacaagaagccttatggcattattattacgacatagaaaagtcagtc
acatacttgctcggtactttaacgcctaaagttaccaagaaagctgctggaaagaaaagt
tctggacctagtccagacgacgttgtcatagcagcgcagtcgaaagccgctggtaaagga
aaaaagggaccgtcaaaaggaccagcaaaagtagaggggtcaactgaagttgaaacacat
aagataaagagcaaagatttagatgttttagcagaattcgagaaagccaaaagtaaaaat
gctgcgaactttgtagttataggtcatgttgacgccggaaaaagcactttgatgggtcgt
ctgctttacgatttaaaagttgtagatcaaagaacagtagaccgttatcgtaaagaggca
gaggcaatgggcaaatcttcattcgctcttgcctgggttctggaccaaggaacggaggaa
agaagcaggggagtaacaatcgatattgcgatgaacaagttcgaaaccgaaaagacaaca
tttacaattctcgatgcccctggtcaccgcgatttcattccgaatatgattgctggagca
agtcaagcagactttgctgtgttagtaattgacgccagtgttggatcttttgaatcggga
ttgaagggacagactaaagaacatgcattattggctcgaagtatgggtgttcaacggatc
attatagcagtcaacaaattagataccgtcggttggtcacaagaacgttttgatgaaatc
tcacaacaagtttctgctttccttacagcagctggattccaagaacagaacatcaagttc
ataccgtgttctggccttcatggtgataacatcgcaagaaaatcaacagaacaagcagcg
gcatggtatacaggaccaactctcgtggaggaactcgatcattctgagccagttaccaga
gcactgaccaaaccccttcgcttaaccatcggcgatatcttccgcggcggcgtccaaaat
ccattaagtatatccggacgtatcgacgccggctctcttcaagttggcgatcaattatta
gcgcaacctagcaacgaaaaatgtttcattaaaggcctcgaaatcgataacgaaccggta
gactgggcagtcgcgggccaaattatcacaatccatcttagcgatatcgaccaagcgcat
ctcaaaatcggcgatgtgctttgcacacctagtcaaccgatcagtaacatcaaaactttc
acagccaaggttctggcatttgaattcttgacgccaatgcaagttgatgttcataggggt
cgcatgcatactgcgggtaagattaaggagttagtggcggtgttagataagggcacgggg
aagacgatggggaagaagaaaccgaggattgttaagccagcgcaggtggcaagggtgatt
gtggagttggaggtcccggtgccgttggaggcgcctgagagggttattttgagatgtgat
ggggtgacggttgcggcgggattgttggagtag
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