Botrytis cinerea (gray mold): BCIN_13g02830
Help
Entry
BCIN_13g02830 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_13g02830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfu03041
]
BCIN_13g02830
03009 Ribosome biogenesis [BR:
bfu03009
]
BCIN_13g02830
Enzymes [BR:
bfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BCIN_13g02830
Spliceosome [BR:
bfu03041
]
Complex A
U2 snRNP components
U2 related factors
BCIN_13g02830
Complex B
BCIN_13g02830
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
BCIN_13g02830
Ribosome biogenesis [BR:
bfu03009
]
Eukaryotic type
90S particles
Helicases
BCIN_13g02830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
SRP54
Cas3-like_C_2
Flavi_DEAD
nSTAND3
PhoH
T2SSE
Motif
Other DBs
NCBI-GeneID:
5435800
NCBI-ProteinID:
XP_001555229
UniProt:
A0A384K0T5
LinkDB
All DBs
Position
13:complement(join(975961..976077,976176..978039,978096..978397))
Genome browser
AA seq
760 aa
AA seq
DB search
MADRRPEEVEMSRAKRARTDDMDPKTNPYLAHMYEEESNGWGNGSNDAGSGLSNFKRHHT
TAAQAHEAEDGPANPFNEKPLSKQYFNILKTRRDLPVHKQRQEFLDMFQKTQILVFVGET
GSGKTTQIPQFVLYDDLPHLTGKLVACTQPRRVAAMSVAQRVANEMDVKLGDEVGYSIRF
EDVTSSKTILKYMTDGMLLREAMHDHNLTRYSCIILDEAHERTLATDILMGLLKEVALRR
PDLKIVIMSATLDAQKFQKYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAALRTVLQIH
ATEAEGDILLFLTGEEEIEDACRKISLEADEMIREADAGPLKVYPLYGTLPPAQQQRIFE
PAPQPLRPGGRPGRKVIVGTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPI
SKASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLANTVLELKKLGIDD
LVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTQLGKLASEFPLDPALAVMLISSPEF
YCSNEILSLTALLSVPQIFVRPASARKRADEMKDLFAHPDGDHLTMLNVYHAFKGEAAQS
DPKGWCHQHFLSLRALQSADNVRQQLKRIMEKSELELVSTDFNDKSYYTNIRRALVAGFF
MQVAKKEATGKTYKTVKDDQSVLLHPSTVLKQDAEWVLYNEFVLTTKNYVRSVTAVRPEW
LLDIAPTYYDLETFGKGEIKTALLRAQDKVKRKQAMKGGR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccgtcgtccagaagaagtagaaatgtctcgagcaaagcgtgcaagaaccgac
gatatggatcctaagacgaatccgtatttggcgcatatgtatgaggaggaaagtaacggc
tggggcaatggttcgaatgatgctggatctggactttcgaacttcaaacgccatcacaca
accgctgcacaggcacatgaagctgaagatgggcctgcgaatcctttcaatgaaaaacct
ctctcgaaacagtatttcaatatcttgaagaccagaagggatttgccagttcacaagcaa
agacaagaatttcttgatatgttccaaaagacccaaattttggtcttcgttggagagact
ggttctggtaaaacaacacaaattcctcagttcgttctctacgatgatcttcctcacctc
actggcaagcttgtcgcatgtacacaacctcgtcgagtagcagctatgtcggtggcgcag
cgtgtggcgaatgaaatggacgtcaagttaggagacgaagtcggatacagcattcgtttc
gaggacgtgacgagttcgaaaaccatacttaaatatatgactgatggtatgcttctcaga
gaagccatgcatgatcataatttgacaaggtatagctgcatcattcttgatgaagctcac
gaacgtactttggctacggatattttgatgggtttgttgaaagaggtggcactcagacga
ccagatctcaagatcgttattatgtctgctacacttgatgcgcaaaagttccagaaatac
ttcaatgatgctccacttctggcagtacccggaagaacacatccagtcgagatcttttac
accccagagccagagagagattatgttgaggcagcacttagaacagttttacagatccac
gccaccgaagccgagggagatattctgttgttcttgactggtgaagaggaaattgaagat
gcatgccgaaaaatatccttagaggcagatgagatgattagagaagcagatgctggtcca
ttaaaggtgtatccactgtacggtacattacccccggcacaacaacaaagaattttcgag
ccagcaccacagccgttgagacccggtggacgcccaggacgaaaagttattgtgggaacg
aacattgcggaaacatctttgacaattgatggtatcgtgtatgtggttgatcctggtttc
agtaaacagaaagtctacaatcctagaatcagagtcgaatcccttcttgtgtcgcctatc
tcgaaagcatctgcacaacaacgagcaggtcgtgctggtcgtactagacccggtaaatgc
tttagattatataccgaagcagcattcaagaaggaacttatcgaacaaacttatcctgaa
attcttcgatcgaatttggccaacactgttttagaattgaagaagcttggtattgacgat
ttggtacattttgatcttatggatcctccagctccggaaaccctcatgagagctcttgag
gaactcaactaccttgcgtgccttgacgatgatggaaaccttacacaattgggcaaactc
gcctcagaattccctctcgaccctgctcttgcagtaatgcttatctcgtccccagagttt
tactgctcaaatgaaatcctatccttgaccgccctcctctctgttccccaaatctttgtt
cgtcctgcttccgccagaaagcgtgccgacgaaatgaaggaccttttcgcccaccctgac
ggagatcacttgaccatgctcaatgtttaccacgctttcaagggagaagctgcacaatcc
gaccctaaaggctggtgtcaccaacatttcctctctctccgagctctgcaatcagctgat
aacgtccgtcaacaactcaagcgtataatggaaaagtcggagcttgagctcgtatctaca
gatttcaatgataaatcctactataccaatattcgtcgtgcactcgtagcgggtttcttc
atgcaagttgcaaagaaggaagcgacgggcaagacctataagacggttaaggatgatcag
agtgtcttattgcatcctagtaccgtgttgaaacaagatgctgagtgggtgttgtataat
gagtttgtgctcacgacaaagaattatgtgagaagtgttacggctgttagaccggagtgg
ttattggacatcgcgccaacatactatgatcttgaaacattcggaaagggagaaattaaa
acagctttattgagggctcaagataaagtcaagaggaagcaggctatgaagggtggtaga
taa
DBGET
integrated database retrieval system
