Botrytis cinerea (gray mold): BCIN_13g04380
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Entry
BCIN_13g04380 CDS
T01072
Name
(RefSeq) Bcrpa190
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCIN_13g04380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfu03021
]
BCIN_13g04380
Enzymes [BR:
bfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCIN_13g04380
Transcription machinery [BR:
bfu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
BCIN_13g04380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
ALTTAQ_rpt
Motif
Other DBs
NCBI-GeneID:
5429174
NCBI-ProteinID:
XP_024552643
UniProt:
A0A384K1E8
LinkDB
All DBs
Position
13:complement(join(1579645..1584574,1584621..1584802))
Genome browser
AA seq
1703 aa
AA seq
DB search
MNISQPVPSAIESVDFAFLSTAEIKSLSVKRIENPVTFDSLLHPVPGGLYDPALGAWGDN
NCTTCNLSSFSCPGHAGHIDLPAPVYHPTFMDQVLRLLRSKCKYCHQFRMSRKEVNRYVC
KLRLIQQGLLSAAEEIENIEVAQPKEGEEPASDSDDESPIDSVIRRRLAFVKKELKAAKA
SGWEWRREKHEGVAEARRVVVKSFMKAITAGRLCGNCQGISPTYRKDRYVKIFEKSLSVK
DKAKMAQGSYRAVNAVQLVHGEKKDRDGDEGIADIDLESNEDEDEGEGESLDVDGDVVMD
GSATSSSKPRVAPLPQRYVDAMEVKASLTLLFEKEQEILSLVYNSRSSAKKPSAVKADMF
FLQTLLVPPNRYRPEAKTGDGEIAEAQQNSLYKQILKSADTVNQIYLDIQNPDRPSQSQT
LRKRDFFDLQEACCSMQDAVNSLIDRDRNPIQGAAGKKNEDGIKQKLEKKEGLFRKNMMG
KRVNFAARSVISPDPNIETNEIGVPPVFAKKLTYPEPVTSHNFKEMQQAVINGVDKWPGA
AAIENENGQVINLRSKTQDERMALANQLLASSSNGASGARNKKVYRHLTNGDVVLMNRQP
TLHKPSIMGHRARVLPGEKTIRMHYANCNTYNADFDGDEMNMHFPQTEVARAEALQIADT
DHQYLSATAGKPLRGLIQDHISVSVWMCNKDTYFDRATYQQLIYNCIRPESGHIVGERIV
TVPPAIIKPVARWTGKQVITTILKNITPLNCAPISLTGKTQTPADRWGADSEEGVVLFNG
GEFITGILDKAQIGPAGGGLIHSVHEVYGPATAGKLLSILGRLLTKYLHMRAFTCGMDDL
RLTPEGEQTRIETLSDAGKIGLEVAAKYVSLEDQKPTETDQELLNRLEDVMRDDSKQAGL
DALMNARAGKLSTSITNACLPQGLVKQFPHNQMQNMTVSGAKGSAVNANLISCNLGQQVL
EGRRVPLMVSGKSLPCFKPFDTHIRAGGYIVNRFLTGIRPQEYYFHAMAGREGLIDTAVK
TSRSGYLQRCLIKGMEGLKVEYDTSVRDSDGSMIQFIYGEDGLDVTKQKHLTDFKFLLQN
LMSELAQLNYGDPRYETIFEEKEAIIKRMKKALKHAKANDLNGPDPVLSEYNPGKYGYAT
SEKYFETLTNYMKTNPDGLVKDKDHPDGVGPRKALEPVLVAKYLKSVVEPGEAVGIVAGQ
SVGEPSTQMTLNTFHLAGHSSKNVTLGIPRLREIVMTASNHISTPSMTLTLNEELTPDEC
EKFAKSISILSLAEVLDWATVKERIGRGVAFQQAKIYDIHIKLFPSKEYCETYAIDIDDV
LFTLQRRFTSKLQHLTRKALGRKKVEKAGKANTAAVPEIGKSVGTIEEARPDAEREMGED
DEDDDGDDDATNDKQKANRSEAVSYAANDDEDDAVQAQNAEPEDVEDMEDEGIGGSPRAA
QSDDEDEGDDENGERKKRKTTAASEELEAQVKKRCEDITRFRFDQDNAEWCDVSLEYDAD
VPKVLMLSIVEEALRSCLIQHIPGIGSCTYDGDNEVKDSKTGKMVKIPVVHTEGVNLKAM
QNYAAFINPNKISTNDIAAMLENYGVEACRSTIVQELHSVFDGHAIAVDMRHLNLIADYM
TRGGGFSPFNRNGMKGSVSPFMKMSFETTVGFLADAVAECDWDDLANPSSRIVIGRMSKV
GTGAFDVLTKVPTGKNEDEDMED
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctcacagccagttccgtcagccattgagagcgttgactttgcatttctttca
acggctgagatcaaatctctctctgtgaagaggatagagaatcctgttacttttgacagt
cttcttcacccagttccaggaggtctttatgatccagctttaggcgcatggggtgataac
aactgcacaacatgtaacctcagttccttttcctgccctggtcatgcaggccatatcgac
ttacccgctcccgtttaccacccaacttttatggaccaagttttgcgattattgcgatca
aaatgcaagtactgccatcagttcagaatgtcgcgcaaggaggtcaatcgatatgtttgc
aaattgcgcctgattcaacaaggtctgctcagcgccgccgaggagattgaaaatatcgaa
gttgctcagccaaaagaaggagaagagcctgctagcgattctgacgacgagtctcccatc
gacagtgtcattcgaagacgacttgcatttgtcaaaaaggagctgaaggccgctaaggcc
tctggatgggaatggagaagagaaaagcatgaaggtgtggctgaagcacgccgagttgta
gttaagagcttcatgaaagcaataactgcaggaaggctatgtggaaactgtcaaggtata
tctccaacttaccgaaaggaccgatatgtgaagattttcgagaaatctttgagtgtcaaa
gacaaggccaagatggctcaaggcagctatcgagctgtgaatgccgttcaattggttcat
ggtgagaagaaagatcgggatggcgacgaaggtattgcagatatagacttggaatccaac
gaggatgaggacgaaggcgaaggcgaaagcctcgacgtggatggggatgtggtcatggat
ggctccgcaacttcaagctctaaacctcgagtcgcaccactaccgcagcgatatgtagat
gctatggaagttaaagcatcattgacattgctgttcgaaaaagaacaagaaattctgtcc
cttgtctacaattcccgatcatccgccaagaagccatccgcggtcaaggctgatatgttc
ttcctacaaacacttcttgtccctccaaatagatatcgccccgaagcgaagacaggcgat
ggtgaaattgctgaagcacaacaaaattctttgtacaagcagatcttaaagagtgctgat
actgtgaaccaaatttatcttgatatacagaatcccgataggccgtcgcaaagccaaaca
ttgagaaagagagatttctttgacctccaagaagcctgttgttcgatgcaggacgctgtt
aattcattgattgatagagatcgaaatcccatccaaggtgcagctggaaagaaaaatgaa
gatggtatcaagcaaaaattggagaaaaaggaaggtcttttcagaaagaatatgatgggt
aaacgtgtcaactttgccgctcgctccgtcatctctccagatccaaatatcgaaacgaac
gaaatcggtgttcctcctgttttcgccaaaaagctcacatacccagaacctgtcacaagt
cataacttcaaggaaatgcagcaagcagttattaatggtgtcgacaaatggcctggtgcc
gctgcaatcgaaaacgagaatggacaagtcatcaatctacgctcaaagacacaggacgag
agaatggcactggcgaatcaattgcttgcctcgtccagtaatggggctagcggtgctcgc
aacaagaaagtttatcgacatcttaccaacggagatgttgtgctcatgaatcgtcaacca
actctgcataagccctctattatgggccacagagccagagtactcccaggagagaagaca
attcgcatgcactacgccaactgtaacacctacaatgctgatttcgatggagacgaaatg
aacatgcatttcccacaaaccgaagttgcccgggcagaagcgctgcagattgctgacact
gatcatcaatatctaagtgcaaccgctggtaaacctctaagaggtttaattcaagatcac
atttccgtttccgtttggatgtgtaacaaagatacgtactttgatcgagctacctatcaa
caacttatctacaattgtattcgcccagaaagtggacatattgtaggcgagcgcatagtg
accgtgccacctgcgatcattaaacctgtcgcacgttggactggaaagcaggtcatcaca
acaatcttaaaaaatatcacacctctcaactgcgccccaatatctcttacaggaaaaact
caaactccagctgatcgatggggtgcggactcagaggaaggtgttgtgcttttcaatggt
ggtgagttcattactggaattttggacaaagcacagatcggccctgctggaggtggtctt
atccactctgtccatgaggtctatggccctgctacagctggaaagctcctcagtatccta
ggtcgcttgctcacgaagtatctccacatgagggctttcacttgcggaatggatgatctc
aggctcacccctgaaggcgagcaaactcgtatcgagactttgtcagatgctggtaagatt
ggtcttgaggtggccgccaagtacgtttctcttgaagaccaaaaacctaccgaaaccgat
caagagctactcaatagattggaggatgtcatgagagacgattccaaacaagcaggccta
gacgcgttgatgaacgctcgcgccggaaagctttctacctccattactaatgcatgtctt
ccccaaggcttggtcaaacaattcccgcacaaccaaatgcagaatatgacagtttctgga
gccaaaggtagtgctgtcaacgccaatcttatttcttgtaatttgggacaacaagtcttg
gaaggacgtagagtaccgttgatggtgagcggaaaatctcttccatgcttcaagccattc
gatacgcatattagagcgggaggttatattgtcaatcgtttcttgactggaattcggcca
caagaatactacttccacgcaatggctggtagagaaggtctgattgataccgcagtcaaa
acttccagatccggatatctacaaagatgtctgatcaagggtatggagggtcttaaggtc
gagtacgatacttccgtgcgagattccgacggatccatgattcaattcatttatggtgaa
gatggactcgatgtgaccaagcagaagcatttgaccgactttaagttcttattgcagaat
ctcatgtcagagcttgcccagttgaactatggcgaccctcgctatgaaactatttttgaa
gagaaggaagcaatcattaaacggatgaagaaagctttgaagcatgcaaaagcgaatgat
ctcaatggtcctgatccggttctttccgaatacaaccctggaaaatatggatacgcaaca
tccgagaaatatttcgagactttgacgaactacatgaagaccaacccagatggtctggtt
aaagacaaggatcatccagatggtgtcggaccaagaaaagctttggaaccagttctcgtt
gccaaatacttgaagtctgtcgtcgaacctggtgaagctgttggtattgttgctggtcag
tctgtaggtgaaccgtcgacacaaatgacgctcaacactttccatttggctggccactct
tctaagaacgtcacactcggtatcccacgtcttcgtgaaattgtcatgacggcaagtaac
catatttcaacgccatcaatgacattaaccctcaacgaagagttaactcctgacgaatgt
gaaaaattcgccaagtctataagcattctttctttggctgaggtattagattgggctaca
gtcaaagagcgaattggacgtggagtagctttccagcaagctaagatctacgatattcat
atcaagcttttcccttcaaaggagtactgtgaaacctacgccattgacattgacgatgtt
ctcttcacacttcaacgaaggtttacatcaaagcttcaacatctcacacgcaaggctttg
ggacgaaagaaggttgaaaaggccggcaaagcaaatactgctgcagtaccagaaattgga
aaatctgtcggtactatagaagaggctagaccagatgcagagagagaaatgggcgaagat
gacgaagatgacgacggtgatgatgatgcaacaaacgacaagcagaaagcaaaccgctct
gaagctgttagttatgctgcaaacgatgatgaagatgatgcggttcaggcacaaaatgct
gagcccgaagatgttgaagacatggaagacgaaggaattgggggcagtccacgtgcagca
caaagtgatgatgaagatgaaggtgatgatgagaatggagagcgcaaaaagcgcaagaca
accgctgcgtccgaggagctcgaagcccaagtcaagaaacgatgcgaagatattactcgt
ttccgcttcgaccaggataacgcagagtggtgcgatgttagccttgaatatgatgccgat
gttcctaaggttctcatgctttccattgttgaagaagctcttcgatcttgcctcatccag
cacattccaggcattggatcatgtacctatgatggcgacaacgaagtcaaggattccaag
acaggaaagatggttaagataccagtggttcataccgagggtgtcaatcttaaggcaatg
caaaattatgccgcattcatcaaccccaacaagatctcgaccaatgacatcgccgcaatg
ctcgagaattatggtgtggaggcttgtcgatcaaccatcgtgcaggaattgcacagtgtt
ttcgatggtcacgctattgccgtagatatgcgtcatttgaatttgattgcagactacatg
accagaggtggtggcttcagtccatttaaccgaaatggaatgaagggcagtgtcagtcct
ttcatgaagatgagtttcgagacaactgttggtttcttggcagatgcagtcgcagagtgt
gattgggatgacttggccaacccaagtagtagaattgtgataggaaggatgagcaaggtc
ggcactggagcctttgatgttcttactaaagtgccaacgggaaagaatgaggatgaggac
atggaggattga
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integrated database retrieval system
