Botrytis cinerea (gray mold): BCIN_14g02390
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Entry
BCIN_14g02390 CDS
T01072
Name
(RefSeq) Bcrrp42
KO
K12589
exosome complex component RRP42
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_14g02390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_14g02390
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BCIN_14g02390
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
BCIN_14g02390
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
5433695
NCBI-ProteinID:
XP_024552909
UniProt:
A0A384K2N3
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Position
14:complement(join(943349..943969,944052..944564))
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AA seq
377 aa
AA seq
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MPPSSTQPLLLSPAELSYLHTSLSLSPPIRPDARTSTQFRPLIAECDVLPGTNGSARICF
ADGTEAIVGVKCEVEKSRPTYQAAELGPSEDDDDEEEDEDMREAIEKEKLEKEQKGERDW
LELSVEIPGFRDDDSMPVFMAAMLSEALLADAEFVGRLWINSRFHWKIYVDILLLSQPLS
YPLPLLSLTTHLALLSTRLPRLKSEGDEDPLFDDDWEASVYLYPRTPQSTNSRPPITLLV
ISVGDNIIFDPSKEELTVAEAVLAITIGERRRKDGDVDMDSSSGRDLRLLAVRTVDLPAR
LTAPGVPNAMNTATGGAAAETTDLASTQRETMNEGGVWQPPRGGIKRKLVATIIAKVMER
GGVAEEVLDGLETVELS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgccaccttcttctacacaacctctcttactctcgcccgccgaactctcttacctccac
acatccctctctctcagccctccaattcgcccggacgctcgtacgtctactcaattccgt
cctctcatcgccgaatgtgatgttcttcctgggacaaatggcagtgcgcgcatttgtttt
gcagatggcactgaagctatcgtgggcgtaaaatgtgaggtcgaaaaatcgcgaccgact
tatcaagctgcagaacttggtccttcggaagatgacgacgatgaggaggaggatgaagac
atgagagaagctatagagaaagagaagctagagaaggaacaaaagggagagagagattgg
ctagaattgagtgtggagattccggggtttagggatgacgatagtatgcctgtttttatg
gcggccatgctgagtgaggcgctgctagcagatgctgagtttgtggggagattatggatc
aattcgaggtttcattggaagatatatgttgatattttactactttcacagccattatcc
tacccactacccctcctttcattaacaacccatctcgcgcttctatctactcgtcttcca
cgcctcaagtccgaaggtgatgaagatccactctttgacgacgactgggaagcttccgtc
tacttatatcctcgaacaccacaatccaccaactcccgacctccaatcacacttctcgtc
atatccgttggtgataacataatcttcgacccgagtaaagaggaacttacagttgccgaa
gctgtattagctattaccattggtgaaagaagacgtaaggatggagacgtagatatggat
tctagctctggaagagatctaaggttgttggctgtgaggaccgtggatttaccagctagg
ttaacagcgcctggtgtgcctaatgcgatgaatactgctactgggggtgcggcagctgag
acgacagatttagcatcgactcaaagagagacgatgaatgagggaggtgtatggcaacca
ccgaggggaggaatcaagagaaagttggtcgcaacgataatcgctaaggtcatggagaga
ggaggtgtagcagaggaggtattagatggattggagactgtggagctgtcctag
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