Botrytis cinerea (gray mold): BCIN_14g04710
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Entry
BCIN_14g04710 CDS
T01072
Symbol
Bclsm1
Name
(RefSeq) Bclsm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCIN_14g04710 (Bclsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_14g04710 (Bclsm1)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BCIN_14g04710 (Bclsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
BCIN_14g04710 (Bclsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
5426628
NCBI-ProteinID:
XP_001546172
UniProt:
A0A384K3C7
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All DBs
Position
14:join(1817659..1817803,1817966..1818034,1818110..1818441)
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AA seq
181 aa
AA seq
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MDQQTTYQGPEGGAEMPALGAGIVPPPPNQQLPAQMFTTAAQLLDLTDKKLMISLRDGRK
LIGILRSWDQFANIVLQSTIERIFIAPPPSSSPQGATQPGLYADIPRGLFLVRGENVLLL
GEIDLDKDDEAPPGYEKADAEVVNRLDKERRAMEAKRDKNRLRKLAELGFEGENSGEAIF
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacaaacgacatatcaaggcccagaaggaggggctgagatgccagctctagga
gctggtatagtacctcctcctccgaatcagcaactcccggcgcaaatgtttacgactgct
gcgcaactccttgacttgactgacaaaaagcttatgatctccctccgcgatggcagaaaa
ctcattggaatactccgaagttgggaccagttcgcaaacatcgtcctccaatctaccatc
gaacggatattcattgcgcctcccccttcttcctcacctcaaggtgcaacgcagcctgga
ctctacgccgatataccccgcggactatttctcgtgcgcggcgaaaatgtgttgttgctg
ggcgaaatagatttggataaagatgacgaggcaccaccgggatatgagaaagcggatgcg
gaggtggtgaataggttggataaggagaggagggcaatggaggcgaagagggacaagaat
cgtttgaggaagttggcagagttagggtttgagggggagaattcgggagaggccatattt
ggatga
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