Botrytis cinerea (gray mold): BCIN_16g03490
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Entry
BCIN_16g03490 CDS
T01072
Symbol
Bctfa1
Name
(RefSeq) Bctfa1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
bfu
Botrytis cinerea (gray mold)
Pathway
bfu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BCIN_16g03490 (Bctfa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfu03021
]
BCIN_16g03490 (Bctfa1)
Transcription machinery [BR:
bfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
BCIN_16g03490 (Bctfa1)
Prokaryotic type
Archaeal type
TFE
BCIN_16g03490 (Bctfa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_PF0610
POLR3C_WHD
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
5431265
NCBI-ProteinID:
XP_001550764
UniProt:
A0A384K7J2
LinkDB
All DBs
Position
16:join(1305543..1305637,1305696..1305791,1305845..1307003)
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AA seq
449 aa
AA seq
DB search
MDLAQMLVRSCMRSFYDTKHILVIDALVIHSALRDDDLAYLMSINTKELHKLCGKLKEDR
FLAVHSRPEIKEGQQRPINRTYYFIDYRATIDAIKWRVFQIDKAVQGNTVPDDERKEYFC
PRCKSEWTMFEVLDKRNYEGFLCHKCDYLLVHDPDNNRGGHEQSSKLNAQFKFITDLLPK
IDQVVIPANTFEQALSTARKVVRDEANPGSETAPVALSSERPTAVRGLDNTGPTSISVTL
TNGEGPTAADIAAEQARKEKTAAQNALPQHFTHSTITGEQVKFANQPTASVGPAVDTNKK
DIKPDTEGSGEGTEIDDYFAQLKAAQAKELEQEADEEYETDDEEEEGFEDVIPNGTTSGA
ATPASSVGGTETKPSVTSGSGISGVLKHSRNESVSASGTSTGGGSPVTGPNTPNEDRPLK
RVRIEEPVPAAPVIKDEEESEEDMEFEDV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgcccagatgttggtgcgctcttgtatgcgctcgttctacgacacaaaacat
atccttgtgatcgatgcgctcgtcattcactccgcgttgcgcgatgatgatttagcatat
ctgatgagcataaacacaaaggagcttcataaactctgtggaaaattgaaggaggatcga
tttcttgcagtgcattcccgcccagagatcaaagaaggccaacaacgaccaattaatcga
acctactattttatcgattatcgtgcaacaatcgatgcgatcaaatggagagtcttccag
atagacaaggccgttcaaggaaacactgtgccagatgacgagagaaaggaatatttttgc
cctcgatgcaaatcggaatggaccatgttcgaggtcttggacaagagaaattatgaaggc
ttcttatgtcataaatgcgactaccttctggtacacgatcctgacaacaaccgcggggga
cacgaacagtcatcgaaactcaatgcacagttcaaattcatcaccgacttactcccaaaa
atcgatcaggtggtcatccctgcgaataccttcgaacaagctctctcaacagctcgtaag
gtggttcgagatgaagctaatcccggcagtgaaactgcgcccgtcgctctttcctccgag
cgaccaactgctgttcgtggtttggataatactggaccaacgtctatctcagttacgttg
acgaatggagaaggacctacagctgcagatatcgctgctgaacaagctcgcaaagagaag
acggctgctcagaacgcgttacctcagcatttcactcacagtactatcactggagagcaa
gtcaagtttgccaatcaacctacggcctctgttggccctgcagttgacaccaataagaag
gatatcaaacctgacaccgaaggtagtggtgaagggactgaaattgatgattattttgcg
caactcaaggctgcacaagctaaagaacttgaacaagaagcagacgaagaatacgaaaca
gacgacgaagaagaagaaggtttcgaagacgtcattccaaatggcaccacatctggtgcc
gccaccccagctagctcggttggaggtacagaaactaagcccagtgtaacgagtggtagt
ggtattagcggtgttctaaagcattcacgaaatgaaagtgtttcagcaagtggaacgagc
acaggtggaggaagtccggtaacaggacctaatacaccaaatgaggatagaccattgaag
agagttagaattgaagagccagttccagcagcaccggttataaaagatgaagaggaaagc
gaagaggatatggagtttgaagacgtttga
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