Brevibacterium flavum: C628_02880
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Entry
C628_02880 CDS
T04445
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bfv
Brevibacterium flavum
Pathway
bfv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C628_02880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfv03021
]
C628_02880
03400 DNA repair and recombination proteins [BR:
bfv03400
]
C628_02880
Enzymes [BR:
bfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C628_02880
Transcription machinery [BR:
bfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C628_02880
DNA repair and recombination proteins [BR:
bfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C628_02880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF496
Motif
Other DBs
NCBI-ProteinID:
ANR61564
UniProt:
A0AA86H7H2
LinkDB
All DBs
Position
624817..628818
Genome browser
AA seq
1333 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLDLIIYFGANIITSVDEEARHSDQTTLEAEMLLEKKDVEADAESDIAERAEKLEED
LAELEAAGAKADARRKVQAAADKEMQHIRERAQREIDRLDEVWQTFIKLAPKQMIRDEKL
YDELIDRYEDYFTGGMGAESIEALIQNFDLDTEAEELRDIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLNAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLRLHECGLPKLMALELFKPFVMKRLVENEYAQNIKSAKRMVERQR
PEVWDVFEEAISEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTLEKSSEEFGGQ
GAYQPADENGPEKGVYSSLAEAIMAYDRGVLGLQAPVRIRLNHLRPPAEVEAEQFPDGWN
QGETWLAHTSLGRVMFNEILPWNYPYLEGIMVRKGGGSDKIMLGDVVNDLAAKYPMITVA
QTMDKMKDAGFYWSTRSGVTIAMSDVLVLPNKEEMLDRYEESARQIEVKYNRGKLTGRER
YDRLVELWKDATDEVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGD
YITRPIKTSFREGLTVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRVED
CGTRQGVRVPVAAEVLDATGAVTGYTRHDLIETSVSGRVLAGDATNAAGEVVLAAGTDLT
ELNIDLLVEAGIKDVKVRSVLTCQTPTGVCAKCYGKSMASGQQVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNCAPIASVEGVIHLEDEGNFYTLT
IVPDDGSDNVVYEKLSKRQGLASTRVAMESNAGAFIERTLTEGDRVTVGQRLLRGAADPH
DVLEILGRRGVEQHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGS
LVDLSEAKLANSEAIGAGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGISRYRNISIKPTEAARNAAYSIPTYGESIYGDDGFG
EFTGASVPLDEAF
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtaaacgtcttcgatgagctccgcatcggcctggccaccgccgacgacatc
cgtcgttggtccaagggtgaggtcaagaagccggagaccatcaactaccgaaccctcaag
cctgagaaggacggtctgttctgcgagcgtatcttcggtccaactcgcgactgggagtgc
gcctgcggtaagtacaagcgtgtccgctacaagggcatcatctgtgaacgctgtggcgtt
gaggtcaccaagtccaaggtgcgccgtgagcgcatgggacacattgagctcgctgcacca
gtaacccacatttggtacttcaagggcgttccatcacgcctcggctaccttttggacctt
gctccaaaggacctggacctcatcatctacttcggtgcgaacatcatcaccagcgtggac
gaagaggctcgccacagcgaccagaccactcttgaggcagaaatgcttctggagaagaag
gacgttgaggcagacgcagagtctgacattgctgagcgtgctgaaaagctcgaagaggat
cttgctgaacttgaggcagctggcgctaaggccgacgctcgccgcaaggttcaggctgct
gccgataaggaaatgcagcacatccgtgagcgtgcacagcgcgaaatcgatcgtctcgat
gaggtctggcagaccttcatcaagcttgctccaaagcagatgatccgcgatgagaagctc
tacgatgaactgatcgaccgctacgaggattacttcaccggtggtatgggtgcagagtcc
attgaggctttgatccagaacttcgacctcgatactgaggctgaagagctgcgcgacatc
atcaacaatggcaagggccagaagaagatgcgtgcactgaagcgcctgaaggttgttgca
gccttccagcgttccggcaacgatcctgccggcatggttctgaacgcgatcccagtgatc
ccaccagagcttcgcccaatggttcagcttgacggtggtcgcttcgctacctccgacttg
aacgacctttaccgtcgtgtgatcaaccgcaacaaccgtctgaagcgcatgattgagctc
ggtgcacctgagatcatcgtgaacaacgagaagcgcatgctgcaggaatctgtggacgcg
ctgttcgacaacggtcgtcgtggtcgcccagttaccggaccgggtaaccgtccgctgaag
tctctgtctgacttgctcaagggcaagcaaggccgtttccgtcagaaccttctgggtaag
cgtgttgactactctggtcgttccgtaattatcgttggtcctcagctgcgcctccacgaa
tgtggtctgcctaagctgatggctctcgagctcttcaagcctttcgtcatgaagcgcttg
gtggagaacgaatacgcacagaacatcaagtctgcaaagcgcatggttgagcgtcagcgc
cctgaggtgtgggacgtcttcgaagaggccatctctgagcacccagtgatgctgaaccgt
gcaccaaccctgcaccgcttgggcattcaggctttcgagcctgtccttgttgagggtaag
gctattcagctgcacccacttgcttgtgaagctttcaacgccgacttcgatggtgaccag
atggcagttcacctgccgctgtccgctgaagctcaggctgaggctcgcgtgctgatgctt
gcatccaacaacattttgtccccagcttccggtaagcctttggccatgcctcgtctggat
atggtgaccggtctgtactacctgactctggagaagtcttccgaggagttcggtggacag
ggcgcttaccagcctgcagatgaaaacggtcctgaaaagggtgtgtattcctcactggca
gaagccatcatggcttatgaccgtggtgtactcggcctgcaggccccagttcgcatccgt
ttgaaccacctgcgcccaccagctgaggtagaagcagagcagttcccagatggatggaac
cagggcgagacttggttggctcacacctccttgggtcgcgttatgttcaacgagatcctg
ccttggaactacccataccttgagggcattatggtccgtaagggtggcggctccgacaag
atcatgcttggcgacgtagtcaatgacctcgctgctaagtacccaatgatcaccgtggct
cagaccatggacaagatgaaggatgctggcttctactggtcaacccgttccggtgtgacc
atcgctatgtctgacgttttggttcttcctaacaaggaagaaatgctggaccgctacgag
gaatctgcacgccagatcgaagtcaagtacaaccgcggtaagctcaccggccgtgagcgc
tacgaccgtctggtcgagctgtggaaggacgcaactgacgaggttggacaggctgtcgag
gatctgtacccagacgacaacccaattccaatgatcgtgaagtccggtgctgccggtaac
atgcgtcagatctggacccttgctggtatgaagggcatggttgtgaactcgaagggtgac
tacatcacccgcccgatcaagacttccttccgtgaaggcttgaccgttctcgagtacttc
aacaactcccacggttcccgtaagggcctggccgataccgcgctgcgtaccgctgactcc
ggttacctgacccgtcgtcttgttgacgtcgctcaggacgtcatcgtgcgtgttgaggac
tgtggcacccgccagggtgttcgcgttcctgtcgctgctgaggttctggatgcaaccggt
gctgtcaccggctacacccgccatgacctgatcgagacatctgtctccggtcgtgttctg
gctggcgatgcaaccaacgctgcaggcgaggttgtgcttgctgctggtaccgacctgacc
gagctcaacattgaccttctggtcgaggctggcatcaaggacgtcaaggttcgttccgta
cttacctgccagaccccaaccggtgtttgtgctaagtgctacggcaagtccatggcttcc
ggccagcaggttgatatcggagaggctgtcggtattgttgctgcacagtccattggtgag
cctggtacccagctgaccatgcgtaccttccaccagggtggtgtcggtggcgatattacc
ggcggtctgcctcgtgttcaggagctgtttgaggcacgtgttcctaagaactgtgcacca
attgcttctgttgaaggtgttatccaccttgaggatgaaggcaacttctacactctgacc
atcgttcctgacgatggctccgacaacgttgtctacgagaagctgtccaagcgacagggt
cttgcatccactcgcgtggctatggagtccaacgctggtgcgttcattgagcgcaccttg
accgaaggtgaccgcgtcaccgttggtcagcgtctgctccgtggtgcagctgatccacac
gacgtgctcgagatcctcggtcgccgtggtgtggagcagcacctcatcgatgaggtgcag
gctgtttaccgtgcacagggtgtggccatccacgacaagcacatcgaaatcatcattcgt
cagatgctgcgtcgcggtaccgtcattgagtccggttccaccgagttccttcctggttct
ttggttgacctctctgaggcgaagctggctaactctgaggcaatcggtgcgggcggtcag
cctgcagagttgcgttctgagatcatgggtatcaccaaggcctctctcgcaactgagtct
tggctgtctgcagcgtccttccaggagaccactcgtgtcctgactgatgctgctatcaac
aagcgctccgataagctcatcggcctgaaggagaacgtgatcatcggtaagctgatccca
gctggtactggtatttcccgttaccgcaacatctccatcaagccaactgaggctgctcgc
aacgccgcatactcgatcccaacttatggtgagtcgatttacggtgacgatggattcggt
gagttcaccggcgcatccgtcccattggatgaggctttctag
DBGET
integrated database retrieval system
