Brevibacterium flavum: C628_06485
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Entry
C628_06485 CDS
T04445
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bfv
Brevibacterium flavum
Pathway
bfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C628_06485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfv03021
]
C628_06485
03019 Messenger RNA biogenesis [BR:
bfv03019
]
C628_06485
Transcription machinery [BR:
bfv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C628_06485
Messenger RNA biogenesis [BR:
bfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C628_06485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANR62264
LinkDB
All DBs
Position
1388206..1390638
Genome browser
AA seq
810 aa
AA seq
DB search
MTTTDNTAANQGELTALRLPDLRKIAADLGLKGTSALRKGDLINAISAAREGKPTAAAKK
TSPRKAPSRTRATQPSAPVEQAQEAPAQTSTAPASAPSEETPAAPARRGRRRVTTTATTP
EPAAPAQSQPAEAQPAQTQAAQQEELPVAAKESAPATENTQGQSQGQAQGDEHDDRFESR
SAARRARRNRQRQIHRDGDDNANANTESEQNTPAQNATAQAESEQTAAPAQAEAAEQNQN
DNSESSENRSDNYRNNNRRSRNNRNNRNYRDNNESSDNAGQSSNDDADNNQARSEDNNDD
RRSRNNRNNDRNDRNNRNYRDNNESSDNAGQSSNDDADNNQARSEDNNDDRRSRNNRNND
RNDRNDRNYRDNHNDDNDDRRNRRGRRNRRGRNDRNDRDNRDNRDNRDNSNDGDNNQQDE
LQQVAGILDIVDHNVAFVRTTGYHAAPSDVFVSNQLIRRMGLRSGDAIEGQVRMNQGGGN
HNNHGRNRQKYNNLVRVEMVNGLPAEETRNRPEFGKLTPLYPNQRLHLETEQKILTTRVI
DLIMPIGKGQRALIVSPPKAGKTTILQNIANAISTNNPECYLMVVLVDERPEEVTDMQRS
VNGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASG
RILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAE
LKLDRKISERRVFPAVDVNPSGTRKDELLLNPDEARIMHKLRRILSALDNQQAIDLLIKQ
LKKTKSNAEFLMQVASSAPMAGTEKEEDYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaccacagacaacaccgcagcgaatcagggtgaactgaccgccctccgactgccg
gatctgcgcaaaattgccgccgaccttgggctcaagggaacctcggcattgcgtaagggc
gatctgatcaacgccatctctgcagcccgcgagggtaagccaaccgcagctgcgaagaag
acttccccacgcaaggccccatcacgcacccgtgcgacacagccttccgcaccggttgag
caagcacaagaagctcccgcgcaaacttcaactgcacctgcttcagcaccatctgaagag
actcccgcagctcccgctcgtcgtggacgtcgccgtgtaaccaccaccgcgaccacccca
gagccagcagcgcctgcacaatcccagcctgcagaagctcaaccagcacagactcaggct
gcacagcaagaagaacttcctgttgcagcgaaggagtccgcaccagctacagaaaacact
cagggccaatcccagggccaagctcagggcgatgagcacgatgatcgctttgagtcccgt
tctgctgcacgccgagcacgccgcaaccgtcagcgccagatccaccgcgatggcgatgac
aatgcgaatgcaaacacagagtctgagcagaacacccctgcccagaatgcaaccgcacag
gctgagtctgagcagactgcagctcctgcacaggctgaagcagctgagcagaaccagaac
gataacagcgagtcctccgagaaccgcagcgataactaccgcaacaacaatcgtcgttcc
cgcaacaaccggaacaatcgcaattaccgcgataacaacgagtcctctgataatgcagga
cagtccagcaatgatgatgccgacaacaatcaggcacggtctgaggacaataacgacgat
cgccgttctcgtaataaccgtaacaacgaccgcaatgatcgtaacaatcgcaattaccgc
gataacaacgagtcctctgataatgcaggacagtccagcaatgatgatgccgacaacaat
caggcacggtctgaggacaataacgacgatcgccgttctcgtaataaccgtaacaacgac
cgcaatgatcgtaacgatcgcaattaccgcgacaaccacaacgacgacaacgatgatcgc
cgcaaccgtcgcggacgccgcaaccgccgtggacgcaacgaccgtaacgatcgcgataac
cgggataaccgggataaccgcgacaacagcaacgatggcgacaacaaccagcaagatgag
ctgcagcaggtagcaggcatcctggacatcgtggaccataacgtcgcattcgtgcgcacc
accggttaccatgctgcaccttctgacgtgtttgtcagcaaccagctgatccgccgtatg
ggtcttcgttccggtgacgccattgaaggtcaggttcgcatgaaccagggtggtggcaac
cacaacaaccatggtcgcaaccgtcagaagtacaacaacttggtgcgcgtggagatggtt
aacggtcttcctgctgaagagactcgcaaccgtcctgagttcggcaagctgactcctctg
tacccgaaccagcgtctgcatttggaaactgagcagaagattcttaccactcgtgtgatc
gacttgatcatgcctattggtaagggacagcgtgctttgattgtgtcgccacctaaggct
ggtaagaccacgatcctgcagaacattgcgaacgctatttccaccaacaacccagagtgc
tacctcatggttgttttggttgatgagcgtccggaagaagttactgatatgcagcgctcc
gtcaacggcgaagtgattgcttctacttttgatcgtccaccatcagagcacactgcggtt
gctgagctggcgattgagcgtgcgaagcgcctggtggagcagggccaggacgtcgttgtt
ctgcttgactccattactcgtttgggccgtgcgtacaacaacagctcacctgcatcggga
cgtattttgtccggtggtgtggattccaatgcactgtacccgccgaagcgtttcttgggt
gctgctcgaaacatcgaaaatggtggatctttgaccatcatcgcaactgccatggtggaa
accggctctgctggtgacaccgtgatcttcgaggagttcaagggcactggtaacgctgag
ctgaagctggatcgtaagatctctgagcgccgcgttttcccagctgtggatgttaatcct
tctggtactcgtaaggacgagctgttgctcaacccggacgaggctcgcattatgcacaag
ctgcgtcgtattctgtctgcacttgataatcagcaagccattgatctgttgatcaagcag
ctgaagaagaccaagtccaatgcggaattcctcatgcaggttgcttccagcgctccaatg
gcaggcacagaaaaagaggaggattactcctaa
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