Brevibacterium flavum: C628_09140
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Entry
C628_09140 CDS
T04445
Name
(GenBank) ribonuclease D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bfv
Brevibacterium flavum
Brite
KEGG Orthology (KO) [BR:
bfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfv03016
]
C628_09140
Enzymes [BR:
bfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C628_09140
Transfer RNA biogenesis [BR:
bfv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C628_09140
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
GATase_6
Motif
Other DBs
NCBI-ProteinID:
ANR62764
LinkDB
All DBs
Position
1956801..1958012
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AA seq
403 aa
AA seq
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MVSDLLQPRDGIPPLLSTPGEFTAAADLLASGTGPFAIDTERASGFRYDDRAFLIQIRRR
GSGTLLFDPEQFRPELTQALKPVLNGQEWIIHAASTDLPSLAWLDLHPGLLFDTELAGRL
AGFDHVNLAAMVEQIFDLHLLKGHGSEDWSKRPLPESWLNYAALDVEMLLELADVMAEIL
DQQGKLPWAEQEFVHIVDQFASMTEPAETSWQDLKGLSTLKRPDQLVVAREMWLERDSFA
ASRDLAPGKVLSNKVIVEVARVLPRTPAELAQVKGFPGRSQGATKRWFRIITRALKSPRR
NWPKPQQRKEGIPDRRAWASYYPEEHEVLQGIRALIDDLAANINVPGENILQPSTLRVAV
WMAKHTGEIHNAETLNAVLRDYGARQWQIDQTFPILSANLLKL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgatcttcttcaaccccgcgatggcattccgcctttgctatctacccctggt
gagttcactgctgcggcagatctcttggctagcggaactgggcccttcgccattgatacg
gaacgcgcgtccggttttagatacgatgaccgcgcatttttgattcagatccggcgccgt
ggcagcggaactctcctcttcgacccggagcagttccgtcctgaattaactcaggcgtta
aagcctgtgctcaatggtcaagagtggattattcacgcagcaagcaccgatttgccgagc
cttgcgtggcttgatcttcaccccggattactctttgatacagaacttgctggccgctta
gccggatttgatcacgttaatctcgctgccatggtggaacagatttttgatctccacttg
ctcaaaggccacggttcggaagattggtccaagcgtcctctgccggaatcttggctcaac
tacgcagcactcgatgtggagatgctgctggagcttgccgatgtcatggctgaaatcctg
gatcagcagggaaaactcccctgggctgaacaggaatttgtccatattgtggatcaattc
gcctcgatgaccgaacctgcagaaacgtcctggcaggaccttaaagggctgtccactctc
aaacgaccagaccaattagttgtggcccgtgaaatgtggttggaacgcgactctttcgca
gcctcccgcgacctggcccccggtaaagtgctgtccaacaaagtcatcgtggaagtcgcc
cgtgttctcccccgcaccccggcagaattagcgcaggtcaagggattccccggtcggtcc
cagggtgccaccaaacgctggttccgcatcatcacccgggctctcaaatcccctcgcagg
aactggccaaagcctcagcagcgcaaggaaggcatccccgatcgtcgcgcgtgggcgtcc
tactacccagaagagcacgaagtgctccaagggattagagcgcttatcgacgacctcgcc
gccaacatcaacgttcccggcgagaatatccttcagccttcaactctgcgggtagctgtg
tggatggctaaacacaccggcgagatccataatgctgaaacactcaacgctgtacttcgc
gattatggtgcccgccagtggcaaattgaccagacttttccgattctgtctgccaacttg
ctgaagctctaa
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