Brevibacterium flavum: C628_11245
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Entry
C628_11245 CDS
T04445
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bfv
Brevibacterium flavum
Brite
KEGG Orthology (KO) [BR:
bfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfv03016
]
C628_11245
Enzymes [BR:
bfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
C628_11245
Transfer RNA biogenesis [BR:
bfv03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
C628_11245
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ANR63171
LinkDB
All DBs
Position
complement(2419527..2420078)
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AA seq
183 aa
AA seq
DB search
MRLFASITPPIEVTEHLINALRPYKDDLRWSDPDNWHITLAFYGELPDGAVEDLIEHLTS
AARINEEFTIRIKGAGSFNRKNLWMGVGGDTKDLRRLMADCLIDPEERRRQRAHLTVAKP
TQRQRSRDWDPVIPDLVHALSIYEGPEWPVDDIELVSSEPGKGRSGGPLYTTVATIALSS
ALV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagactgttcgcgtctatcactccgccgattgaagtcaccgagcatctgatcaacgcg
cttcgtccctacaaggatgatctgcggtggtctgatccagacaattggcacatcacgttg
gcgttctatggagaattacctgatggggcagtcgaagatctcattgaacatctgacaagt
gcagcccgaatcaatgaagaattcaccatcagaatcaaaggcgcaggttcatttaatcgg
aagaatttgtggatgggtgttggtggtgacaccaaagatctgcggcgactgatggctgat
tgtctgattgatcctgaggaacgccgacgccagcgtgcacacctgaccgtggcgaaacca
acgcagcgacagcgcagccgcgattgggatcctgtcatccccgatctggtccacgctctc
tctatctacgaaggccccgaatggccagtcgatgatattgaactggtgtcttcggaaccc
ggaaagggaagaagcggtgggccactgtatacaaccgtggccaccattgcgttgtcatct
gcgctggtttaa
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