Blastomonas fulva: B5J99_00510
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Entry
B5J99_00510 CDS
T05612
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
bfw
Blastomonas fulva
Brite
KEGG Orthology (KO) [BR:
bfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfw03019
]
B5J99_00510
Enzymes [BR:
bfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B5J99_00510
Messenger RNA biogenesis [BR:
bfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B5J99_00510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_19
ResIII
HA2_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ASR50141
UniProt:
A0A222WWK0
LinkDB
All DBs
Position
complement(106942..109383)
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AA seq
813 aa
AA seq
DB search
MAELPIHAVLPDLLAALATSPNAVLVAPPGAGKTTTVAPALLDQSWCTGQILLLSPRRLA
ARAAAERMAEFAGESVGQTIGYATRMDSKTSAATRVLVLTEGIFVNRIQADPELAGVSAV
LFDEVHERSLDSDFGLALALEAQAAFRPDLRLLAMSATLDGARFSALMGDAPVLNSEGRS
HPLALRHLGRRGEQRLEDAMAQAIRIALREEAGDVLAFLPGVGEIARTQERLANLGDAIV
VLPLHGTLTPPEQRAAIRRDPQGRRKVILATSIAETSLTIDGVRIVVDSGMARRARYDPL
AATTRLVTERASLAAATQRAGRAARQGPGVAYRLWEEAATGGLPRFDPPEILDSDLAPLV
LQCAAWGESDPLRLNWLDPPPAPLLAEARRRLQALDAVDATGAITLNGRAIAALPLPPHL
AHMLLCGARAGCAILAAEIALLLQERGLGGQGEDLDARLARWRSDRGERASKSRKLAQRW
AQLAERQIANPNSSDLPSAILLALALPDRVAKRRDAGGEVWASAGGRSFRLDTASSLITA
QWLAIGEVQGKAADARILSAMALDPADVETHLAARIERVSRCSFALAERRAEARLERRLG
AIRLASGPDPSPSPDALCAALIGGVREHGLDLLGWGDKALALRQRARFAGIAVLEDAALL
DSLDDWLAPLLAGHRSLGAASPGHLHNALQNLLGWDGAQTVDRIAPPEFTSPAGTRHAID
YSATAGPTVELRVQALYGLDVHPVVGRDHIPLVLSLTSPAGRPIQTTRDLPGFWRGSWRD
VAKDMRGRYPRHHWPDAPWEAQASLATKKRQGI
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctcccgatccacgcagtcctccccgatctgctggctgcgctcgccacctca
ccgaatgccgtgctcgtcgccccgccgggtgcgggcaaaaccacgaccgttgcgcctgcg
ctgctcgatcagagctggtgcaccgggcagatcctgctgctttccccgcgccgccttgcc
gcgcgcgcggctgccgagcggatggcggagtttgctggcgagagcgtcggccagaccatc
ggatatgccacccgcatggacagcaagaccagcgcggctacccgcgtgctggtgctgacc
gaggggattttcgtcaaccgtatacaggccgatcccgagcttgcaggcgtctcagcggtg
ctgttcgacgaggtccacgaacgcagcctcgatagcgatttcgggctggcgctggcgctc
gaggcgcaagcggcgttccggcccgacctgcgcctgctcgcaatgtcggcgacgctcgat
ggcgcgcgcttttctgcgctgatgggggatgcgccggtgctgaacagcgaggggcgctcg
catccgctggcgctgcgccatctcggacggcgcggcgaacaacggcttgaggacgcgatg
gcgcaggcgatccgcatcgcattgcgcgaggaagcgggcgatgtgctcgccttcctcccc
ggtgtcggggaaattgcccgcacgcaggagcggctggcgaacctgggggatgcgatcgtg
gtgctgccgcttcacggcacgctgaccccgcccgaacagcgcgccgcgatccggcgcgat
ccgcaaggccgccgcaaggtgattctcgccaccagcatcgccgagaccagcctgaccatc
gatggcgtgcgcatcgtggtcgacagcggcatggcgcggcgcgcgcgctatgatccgctc
gccgcgaccacccggctggtgaccgagcgcgccagcctggctgccgccacccagcgcgca
ggccgcgcggcgcggcaggggccgggggtcgcgtatcggctgtgggaggaggccgcgacc
ggcgggctgccgcgcttcgacccgcccgagattctcgacagcgatcttgcgcctttggtg
ctgcaatgcgccgcctggggggagagcgatccgctgcggctgaactggctcgacccgccg
cccgcacccttgctggccgaggcgcgcaggcggctgcaggcgctcgatgcggtcgatgcc
accggcgcgatcacgctcaatgggcgcgcgatcgccgcgctgccgctgccgccgcatctt
gcgcatatgctgctgtgcggtgcgcgcgcaggatgcgccatactggccgcagaaattgcg
cttctgcttcaggagcgcgggctgggcgggcagggcgaggacctcgacgcgcggctggcg
cgctggcgctccgaccgcggcgagcgcgcatcgaaatcgcgcaagctcgcacagcgctgg
gcgcaattggcagagcggcagatcgccaatccgaactcttccgaccttccatccgccatc
ctgctagccctcgctttgcccgatcgggtcgccaagcggcgcgatgctggcggagaggtc
tgggcgagcgcaggcgggcgcagcttccggctcgatacggcctcctcgctgatcaccgcg
caatggctggcgattggcgaggtgcagggcaaggcggcggatgcacgcatcttgagcgcg
atggcgctcgaccctgcggacgtcgaaacccatctggcggcgcggatcgagcgcgtcagc
cgctgcagttttgcgctggccgagcgccgcgccgaggcccggctcgaacgcaggctgggt
gcgatccggctggcaagcgggccggacccgtcgccatcgcccgatgcgttgtgcgccgcg
ctgatcggcggggtgcgcgagcatggcctcgatctgctcggctggggtgacaaggcgctg
gccttgcggcagcgcgcacgctttgccgggattgcggtgctggaggatgcagctttgctc
gatagcctggacgactggctcgccccgctgctcgccgggcaccgctcgctgggcgcggct
tcgccagggcatttgcacaatgcgcttcaaaatcttctgggatgggacggcgcgcagacg
gtcgatcggatcgcaccgcccgagttcaccagccccgccgggacccgccacgcgatcgac
tattcggccaccgcaggcccgacggtcgagctgcgggtgcaggcgctgtacgggttggat
gttcacccggtggtcgggcgcgaccatatcccgctggtgctgtcgctgacctcccccgcc
ggtcgcccgatccagaccacgcgcgatctccccggcttctggcgcggcagctggcgcgac
gtcgccaaggacatgcgcggccgctacccgcgccaccactggcccgatgcgccgtgggaa
gcgcaggcgagcctggcaacgaagaagcggcaggggatttga
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