Blastomonas fulva: B5J99_03240
Help
Entry
B5J99_03240 CDS
T05612
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfw
Blastomonas fulva
Pathway
bfw03420
Nucleotide excision repair
bfw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B5J99_03240
03430 Mismatch repair
B5J99_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfw03400
]
B5J99_03240
Enzymes [BR:
bfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B5J99_03240
DNA repair and recombination proteins [BR:
bfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5J99_03240
MMR (mismatch excision repair)
Other MMR factors
B5J99_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ASR50603
LinkDB
All DBs
Position
complement(678542..680854)
Genome browser
AA seq
770 aa
AA seq
DB search
MNSLAPASEFPPPSASDPAYLQGLNTPQREAVLSSEGPVLVLAGAGTGKTAALTARLAHL
IATRRAWPSEILAVTFTNKAAREMRERVGRIIGDAVEGMPWLGTFHSIGAKMLRRHAELV
GLQSNFTIIDTDDQLRLLKQLIQAADIDDKRWPARQLAGCIDRWKNKGLNPHELDAAESE
LYANGRGQELYTAYQDRLKALNACDFGDLLLHMLTLLKTDRAVLEQYQQRFKYILVDEYQ
DTNSSQYLWLRLLAQARKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGARIIRLEQNY
RSTPHILGAASGLIASNSDRLGKTLWTEVDAGQKVRVLGVWDGPEEARRTGEELERITRE
GTSLDKTAILVRASFQTREFEDRFIAIGMPYRIVGGFRFYERAEIRDALAYLRVVNQPAD
DLAFERIVNTPKRGLGDKAVEKVHRVARATGLPLSAAAFQILDSDELPARARTALAGLMR
GIARWREMLTTMNPADLVRQIMDESGYTQVLQAEKSVEASGRLENLSELARAMEEYESLG
DFLEHVSLVMDNEASADEAKVTMMTIHGAKGLEFEHVFLAGWEEGVFPSQRSLDEGGLAS
LEEERRLAYVAITRARSTCTIMHAANRRIYGQWTSSIPSRFIGELPAEHIEEESSMTGGA
SLWRAGLSERDDPFAHLARDPERAARRGPGWQRAAQVPGGFNATPQRVAEARTSAISLGN
AGRSDVDIGTRVFHQKFGYGLVAEKEGNKLEIDFETSGRKRVIDSFISLA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtctcgcccccgcatccgaattcccgccgccctcggccagtgaccccgcttat
ctgcaggggctcaacacgccgcagcgcgaagccgttttgtcgtccgaagggccggtgctg
gtgctggcaggcgcgggcacgggcaagaccgcggcgctgaccgcgcggctggcgcatctg
atcgcgacccggcgtgcatggccgtccgaaattctcgccgtcacctttaccaacaaggct
gcgcgcgagatgcgcgagcgcgtcgggcggatcatcggcgatgcggtcgaaggcatgccg
tggctgggcaccttccactcgatcggcgccaagatgctgcgccgccatgccgagctggtc
gggctgcagagcaacttcacgatcatagacaccgacgaccagttgcggctgctcaagcag
ttgatccaggccgccgatatcgacgacaaacgctggcccgcgcggcaactcgccgggtgc
atcgaccgctggaagaacaaggggctcaatccgcacgagctcgacgccgccgaaagcgag
ctttacgccaacgggcgggggcaggagctgtacaccgcctatcaggaccggctgaaggcg
ctcaatgcctgcgatttcggcgatttgctgctgcacatgctgacattgctcaagaccgac
cgcgcggtgctcgagcagtatcagcagcggttcaagtacatcctggtcgacgaatatcag
gacaccaattccagccagtatctgtggctccggctgctcgcacaggcgcgcaagaatatc
tgctgcgtcggcgatgacgaccagtcgatctattcgtggcgcggcgcggaggtcgcgaac
atcctgcggttcgagaaggattttcccggcgcgcggatcatccggctcgagcagaattac
cgctccaccccgcacattctgggcgccgcatccggcctgatcgcgtcgaacagcgaccgg
ctcggcaagactttgtggaccgaggtcgacgccgggcagaaggtccgcgtgctgggcgtc
tgggacgggcccgaagaggcacggcggaccggcgaggagctcgaacggatcacgcgcgag
ggcaccagcctcgacaagaccgcgatcctggtgcgcgcctcgttccagacccgcgagttc
gaggaccggttcatcgccatcgggatgccctaccgcatcgtcgggggcttccgcttctat
gagcgagccgaaatccgcgatgcgctggcttacctgcgcgtcgtcaaccagcctgcggac
gatctggcgttcgagcggatcgtcaacacgcccaagcgcggcctgggcgacaaggcggtc
gagaaggtgcaccgcgtcgcgcgcgccaccgggctgccgctcagcgctgccgcattccag
atcctcgacagcgacgaactgcccgcgcgtgcccgcacggcgctggcggggctgatgcgt
ggcatcgcgcgctggcgcgagatgctcaccacgatgaaccctgcggacctcgtccggcag
atcatggacgaatcgggctatacccaggtgctgcaggccgaaaagtcggtcgaggcatcg
gggcggctcgagaacctctccgaacttgcccgcgcgatggaagagtatgagagcctcggc
gatttcctcgagcatgtcagcttggtgatggacaacgaggcatcggccgacgaggccaag
gtcacgatgatgaccatccacggcgccaaggggctcgaattcgagcacgtcttcctcgcc
ggctgggaggagggggtgttcccctcgcagcgctcgctcgacgagggcgggcttgccagc
ctcgaggaagaacgccgcctggcttatgtcgcgattacgcgcgcgcgcagcacctgcacg
atcatgcacgccgccaaccggcggatctatggccagtggaccagttcgatcccctcgcgc
ttcatcggcgaattgccggcagagcatatcgaggaagaaagctcgatgaccggcggggcg
tccctgtggcgggcagggctgtcagagcgcgacgatccgttcgcgcacctggcgcgcgac
cccgaacgcgcggcgcggcgcgggcccggctggcagcgtgcggcgcaggtccccggcggg
ttcaacgcgacgccgcagcgtgtcgccgaagcccgtaccagcgcgatcagcctgggcaat
gccgggcgcagcgatgtcgatatcggcactcgcgtcttccaccagaaattcggttacggg
ctggtggcggagaaggagggcaacaagctggagatcgatttcgagacttcgggtcgcaag
cgggtgatcgacagctttatcagcctcgcttga
DBGET
integrated database retrieval system
