Blastomonas fulva: B5J99_10835
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Entry
B5J99_10835 CDS
T05612
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bfw
Blastomonas fulva
Pathway
bfw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5J99_10835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfw03019
]
B5J99_10835
03009 Ribosome biogenesis [BR:
bfw03009
]
B5J99_10835
Enzymes [BR:
bfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B5J99_10835
Messenger RNA biogenesis [BR:
bfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B5J99_10835
Ribosome biogenesis [BR:
bfw03009
]
Prokaryotic type
rRNA helicases
B5J99_10835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ASR51895
LinkDB
All DBs
Position
complement(2295698..2297785)
Genome browser
AA seq
695 aa
AA seq
DB search
MPFDTVPAILSDALDAHGYDTLTPVQQAVIAPDAHGRDLIVSAQTGSGKTVAFGLAMASD
LIGEDGRVAPSHTPQTLIVAPTRELALQVSREFIWLYGPAGARIATCVGGMDASKERRAL
SQGAQIVVGTPGRLRDHLERGALDLSGLKVAVLDEADEMLDMGFREDLEEILDATPDGRR
TMLFSATMPQPIVALAKRYQRDAHRISTVGADRGHGDIEYLAVTVAPADIENAVVNLLRL
HEAETAMLFCATRDNVRHLHASLIERGFSAVALSGEHSQNERNSALQALRDRRARVCVAT
DVAARGIDLPSLSLVIHVELPRDMDTLKHRSGRTGRAGKKGTALMIVPYPRRRRLESMLR
GANINAQWINAPSAEDIRRADHDRLLDKLRAPVEADEADRMLAEKLLGERTAEDIAIMLV
QAHRAQMPLPEELLDADSSPPPRETGPRAGFEDTVWFTMNIGRRQNADPRWLLPLLCRRG
HITRSEIGAIRLGDEQSHFEVPRAVADRFAEAVERTAGGEDSDEGSLVIARADGPPQGHS
RSGPPRRPEGRNGSGSGYKGKGNSGPLKPRYEAKAFGEKKPFGDKKPFGDRKPAGDRKPY
GEPRAFGDKKPFGDNKSFGDKKPYGDKKTNADRASFADKPRGPRSDGPRSDGPRSGGPGG
GKPFAPRGDSRPRPEGKPRFDAKPRAGGPGKRPKG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgccatttgatactgttcccgccatcctgtcggacgcgctcgacgcgcacggctatgat
accctgacaccggtccagcaggccgtgatcgccccggacgcgcatggccgcgacctgatc
gtttcggcgcagaccggatcgggcaagaccgtcgcctttggccttgccatggcaagcgac
ctgatcggcgaggatggccgcgtggcccccagccacaccccgcagacgctgatcgttgcc
ccgacacgcgaactggcactccaggtcagccgcgagttcatctggctctatggccccgca
ggtgcgcgcatcgcgacctgtgtgggcggcatggacgcatccaaggaacgccgcgcactg
tcgcagggcgcacagatcgtcgtcggtacccctggtcgcctgcgcgatcacctcgaacgc
ggcgcactcgacctctccggcctcaaggtggcggtgctcgatgaagccgacgaaatgctc
gacatgggctttcgcgaagatctcgaggaaatcctcgacgcgacccccgatggccgccgc
accatgctgttttcggcaaccatgccgcagccgatcgtcgcgcttgccaagcgctaccag
cgcgatgcgcatcgcatttcgaccgtgggcgcagaccgcggccatggcgatatcgaatat
ctcgcggttaccgtggcccctgccgatatcgagaacgccgtcgtcaacctgctgcgcctg
cacgaggcggaaacagcgatgctgttctgcgcgacacgcgacaatgtccgccatctccat
gccagcctgatcgagcgcggcttttccgcggtcgcattgtccggcgagcacagccagaac
gagcgcaactccgcgttgcaggcgctgcgtgatcgccgcgcgcgcgtctgcgtcgccacc
gacgttgccgcccgcgggatcgatctgcccagcctttcgcttgtgatccatgtcgagctg
ccgcgcgacatggacacgctcaagcaccgctcgggccgcaccggacgcgcgggcaagaag
ggtaccgcgctgatgatcgtgccctatccgcgccgccgccgcctcgaatcgatgctgcgc
ggagccaatatcaacgcgcagtggatcaacgcgccgtcggccgaggacatccgccgcgcc
gaccatgaccgcctgctcgacaaattgcgcgcgccggtcgaggctgacgaggccgaccgc
atgctggccgagaagctgctgggcgaacgcaccgcagaagacatcgcgatcatgctggtg
caggcgcaccgcgcgcagatgccattgcccgaggaactgctcgacgccgattcatcgccg
cccccgcgcgaaactggcccgcgcgccgggttcgaggacacggtatggttcacgatgaac
atcggacgccgccagaacgctgacccgcgctggctgctgcctttgctgtgccgtcgcggc
cacatcacccgcagcgagatcggtgcgatccgccttggtgacgagcagagccatttcgag
gttccccgtgccgttgccgatcgctttgccgaagctgtagagcgtaccgcaggcggcgag
gacagcgacgagggcagcctggtgatcgcgcgtgccgatggtcccccgcagggccacagc
cgctcgggcccgccgcgccgccccgaaggccgcaacggttcgggatcgggctacaagggc
aagggcaattccggcccgctcaagcctcgctatgaagccaaggcattcggcgagaaaaag
ccgttcggcgacaagaagccgttcggcgatcgcaagcctgcaggcgaccgcaagccctat
ggcgagccgcgcgcgtttggcgacaagaagcccttcggcgacaacaagtcgtttggtgac
aaaaagccctatggcgacaagaagaccaatgccgaccgggcatccttcgccgacaagccg
cgcggaccgcgcagcgatggtccgcgcagcgatggcccgcgttcgggtggccccggcggc
ggcaagcccttcgccccgcgcggcgacagccgtccacgtcccgaaggcaagccccgcttt
gatgccaagccgcgcgcaggtggccccggcaagcgccccaagggctga
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