Blastomonas fulva: B5J99_12725
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Entry
B5J99_12725 CDS
T05612
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bfw
Blastomonas fulva
Brite
KEGG Orthology (KO) [BR:
bfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfw03016
]
B5J99_12725
Enzymes [BR:
bfw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B5J99_12725
Transfer RNA biogenesis [BR:
bfw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B5J99_12725
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ASR53522
LinkDB
All DBs
Position
complement(2672526..2673755)
Genome browser
AA seq
409 aa
AA seq
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MQIHPLITDTDSLARLCTRLAQSDFVAVDTEFMRENTYWPELCLVQIGNLEEAAAIDPKA
PGIDLSPLLDLLTENPEVLKVFHAGPQDIEIIFNLTGKTPTPLFDTQVAAMALGQAEQIG
YANLVESWLGLTVDKGARFTDWSRRPLEARQIDYAIGDVTHLAKIFPKMLDKLRRTGRGA
WLDIEMEKLGDPRQYKPDPDTLWQRIRPPGRSAQILGRMRALAWWRETEAQDKNLPRGRI
MKDETLADIAAHPPSHQSDLGKVRGLSAAWRENDIGARMMDALIAARPLSPAEMPPKSPR
GPALGKEGALVADLLKLLLKIRSREIDVAARLLARSDDLEALAAGVRKNLPILEGWRFEQ
FGRDALALVEGRMAFAIADGRIKMTRTELAAEAEPDADAAVAAALAEQP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcacccactgattaccgacaccgattccctcgcgcggctatgcacgcgtctg
gcccaatccgactttgtcgcggttgataccgagttcatgcgcgagaacacctattggccc
gagctgtgcctggtacagatcggcaatctggaagaggctgcggccatcgatcccaaggca
ccgggaatcgatctgagcccgctgctagacctgctcaccgagaatcccgaggtcctcaag
gtcttccatgcaggaccccaggacatcgagatcatcttcaacctgaccggcaagacaccc
accccgctgttcgacacccaggttgccgcaatggcgctcggccaggccgagcagataggc
tatgccaaccttgtcgaaagctggctgggactgacggtcgacaagggtgcgcgcttcacc
gactggtcccgcaggccgctggaggcccgccagattgattatgccattggagatgtcacc
catctggccaagatcttccccaagatgctcgacaaattgcgccgcaccgggcgcggtgcg
tggctggatatcgagatggaaaagctgggcgatccgcgccagtacaagcccgatcccgac
actttatggcagcgcatccgtccgccgggccgcagcgcgcagatcctcggccgcatgcgc
gcgctcgcctggtggcgcgagactgaggcccaggacaagaacctgccgcgcgggcgcatc
atgaaggacgagacgcttgccgacatcgcggcgcatccgccctcgcaccagtccgatctg
ggcaaggtgcgcggcctgtccgcggcatggcgcgaaaacgatattggcgcgcggatgatg
gatgcgctgatcgccgcgcgtccgctcagcccggcggaaatgccgcccaagagcccgcgt
ggccctgcactgggaaaggaaggcgcgctcgtcgctgacctgctcaagctgctgctcaag
atccgatcgcgcgagatcgatgtcgccgcgcggctgctcgcgcgcagcgacgatctggaa
gcgctggcggcgggtgtgcgcaagaacctgccgatcctggaaggctggcggttcgaacag
ttcggccgcgatgcgctggcgctggtcgagggtcggatggcgtttgccatcgccgatggc
cggatcaagatgacgcgcaccgaacttgcggcagaagccgagccggatgccgatgccgct
gtcgccgctgcgcttgcggagcagccatga
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