Blastomonas fulva: B5J99_13585
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Entry
B5J99_13585 CDS
T05612
Name
(GenBank) MBL fold hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bfw
Blastomonas fulva
Pathway
bfw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5J99_13585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfw03019
]
B5J99_13585
Messenger RNA biogenesis [BR:
bfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B5J99_13585
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GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
RNase_J_C
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ASR52360
UniProt:
A0ABN5B9D8
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Position
2843830..2845515
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AA seq
561 aa
AA seq
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MKPGKELLFLALGGSGEIGMNANLYGCDGKWVMVDLGMTFSDPAYPGVELVFPDLEFIEE
RADDLLGIVLTHGHEDHIGALPYLAADLNVPLFATPFTADLIRRKLEEQGLVKDVELNVI
ENEGSLQLGPFGFRYLPLAHSIAEGNALLIDTPYGRIFHTGDWKLDDEPIVGVPSTPETL
TALGDEGVLAMVCDSTNVFNPESSGSEGAVRDALIKAVKPLKGRALITTFASNVARLHTL
GEVAKATNRAFCVAGRSLDRIIAVAKANGYLKDLPELVDFDTAMGMPRRQVLVVATGGQG
EPRAALARVAEGNHQIKLEAGDTVLFSSKVIPGNEIAIGRIQNKLAEDGIQMITDRQADI
HVSGHPGRPELAEMYRWIRPQILVPVHGEMRHMTEQARFGTEQGIPSVVVQKNGDMVRLA
PGKPGVISRERAGRLVLDGDVILPADGMTMAERRKLAVNGQVSVAVALDGRGGLIGDPVV
RALGLPVEDDLDAFIAETIEDVREAINKPGKAKPKGRGGRSEGRSSGGGNDVQEAIRLAV
RRAATRWTGKKPVVTVLMIAG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctggaaaagaattgttgttcctggcccttggcgggtcgggcgaaattggcatg
aatgccaacctctacggctgcgacggcaaatgggtcatggtcgatctgggcatgaccttc
agcgatccggcctatcccggtgtcgagctggtgtttcccgatctagagttcatcgaggaa
cgcgccgacgacctgctcggcattgtgctgacgcatggccatgaagaccatatcggcgcg
ctgccgtatctggcggcggacctcaatgtcccactgttcgcaacgccgttcaccgccgac
ctgatccgccgcaagctcgaggagcaggggctggtcaaggatgtcgagctcaacgtcatc
gagaacgagggcagccttcagctcggcccgttcggcttccgctatctgccgctggcgcac
tcgatcgcagaaggcaacgcgctgctgatcgacacgccctatggccgcattttccacacc
ggcgactggaagctcgacgacgagccgatcgtcggggtgccttcaacgcccgagacgctc
accgcgctcggcgacgagggcgtgctcgcgatggtctgcgattcgaccaacgtcttcaat
cccgaaagctcgggctccgaaggcgcggtgcgtgatgcgctgatcaaggcggtaaagccc
ctcaagggtagggcgctgatcaccaccttcgcctccaatgtcgcgcgcctgcacacgctg
ggcgaggttgccaaggcgaccaatcgcgccttctgcgtcgccgggcgctcgctcgatcgc
atcatcgcggtcgccaaggccaatggctatttgaaggaccttcccgaactggtcgacttc
gacaccgccatgggtatgccgcgccgccaggtgctggtagtcgccaccggcggccagggc
gaaccgcgcgctgcgctcgcgcgcgtggccgagggcaaccaccagatcaagcttgaggcg
ggtgacaccgtgctgttttcgtccaaggtcatccccggcaacgagatcgcgattggccgc
atccagaacaagctggccgaagacggcatccagatgatcaccgaccgccaggccgatatt
catgtgtcgggccatccgggacgcccagagcttgcagagatgtaccgctggatcaggccg
cagatcctggtgccggtgcatggcgaaatgcgccacatgaccgagcaggcccggttcggg
accgagcagggcatcccttcggtggtggtgcagaagaacggcgatatggtacggcttgcc
cccggcaagcccggagtgatcagccgcgagcgcgccggccggttggtgctggatggcgat
gtcatcctgcccgccgatggcatgaccatggccgagcggcgcaagctcgcggtcaatgga
caggtcagcgtcgcggtcgcgctcgacgggcgcggcggactgatcggcgatccggtggtg
cgcgcgctggggcttccggtcgaggacgatctcgatgcattcatcgccgagacgatcgag
gatgtgcgcgaggcgatcaacaagccaggcaaggccaagccgaagggcaggggcggcagg
tcggaaggccggtcgtcgggcggaggcaacgacgtgcaggaggcgatccgccttgccgtg
cgccgtgccgcgacgcgctggaccggcaaaaagcctgtcgtcacggtcttgatgatcgcg
ggctga
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